RNA–Protein interactions for RNA: ENST00000542815.7

ZEB1-208, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,217 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-208ENST00000542815 TDRD3Q9H7E2 651 aaKnown RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 CNNM1Q9NRU3 951 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 TMOD2Q9NZR1 351 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 ZNFX1Q9P2E3 1918 aaKnown RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 TAF5LO75529 589 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 COL6A1P12109 1028 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 GSPT1P15170 499 aaKnown RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 SDSP20132 328 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 FCGRTP55899 365 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 TAF1CQ15572 869 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 GRIK5Q16478 980 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 C1orf53Q5VUE5 145 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 HTATIP2Q9BUP3 242 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 PUS3Q9BZE2 481 aaKnown RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 ELP3Q9H9T3 547 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 ERC2O15083 957 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 CD2BP2O95400 341 aaKnown RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 APPP05067 770 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 PTPRAP18433 802 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 OSBPP22059 807 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 GYG1P46976 350 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 MNX1P50219 401 aaPredicted RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 NKX3-2P78367 333 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 GSTO1P78417 241 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 TMEM39BQ9GZU3 492 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 GNL3LQ9NVN8 582 aaKnown RBP6.14□□□□□ -1.43
ZEB1-208ENST00000542815 OGDHLQ9ULD0 1010 aa6.14□□□□□ -1.43
ZEB1-208ENST00000542815 TANC1Q9C0D5 1861 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 GNAI2P04899 355 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 MCCP23508 829 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 DMTNQ08495 405 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 LRIT3Q3SXY7 679 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 AXDND1Q5T1B0 1012 aaPredicted RBP6.13□□□□□ -1.43
ZEB1-208ENST00000542815 SH3BP5LQ7L8J4 393 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 MEIS3Q99687 375 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 TMEM106CQ9BVX2 250 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 RRAGDQ9NQL2 400 aaPredicted RBP6.13□□□□□ -1.43
ZEB1-208ENST00000542815 NRBP1Q9UHY1 535 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 AKAP2Q9Y2D5 859 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 LCTP09848 1927 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 SMARCA5O60264 1052 aaPredicted RBP6.13□□□□□ -1.43
ZEB1-208ENST00000542815 BAG4O95429 457 aaKnown RBP6.13□□□□□ -1.43
ZEB1-208ENST00000542815 GNAI3P08754 354 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 KLHL40Q2TBA0 621 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 LRRC24Q50LG9 513 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 DHX36Q9H2U1 1008 aaKnown RBP6.13□□□□□ -1.43
ZEB1-208ENST00000542815 C9orf78Q9NZ63 289 aaPredicted RBP6.13□□□□□ -1.43
ZEB1-208ENST00000542815 GJD2Q9UKL4 321 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 PNMA3Q9UL41 463 aa6.13□□□□□ -1.43
ZEB1-208ENST00000542815 TMEM265A0A087WTH1 108 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 ESPNB1AK53 854 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 PDHXO00330 501 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 SGPL1O95470 568 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 HOXC6P09630 235 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 UBXN2AP68543 259 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 PABPC4Q13310 644 aaKnown RBP eCLIP6.12□□□□□ -1.43
ZEB1-208ENST00000542815 TTLL12Q14166 644 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-208ENST00000542815 CLEC17AQ6ZS10 378 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 JARID2Q92833 1246 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-208ENST00000542815 SECISBP2LQ93073 1101 aaKnown RBP6.12□□□□□ -1.43
ZEB1-208ENST00000542815 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-208ENST00000542815 SYNPO2Q9UMS6 1093 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 MCM2P49736 904 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 SLC9C1Q4G0N8 1177 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 TPRNQ4KMQ1 711 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 METTL24Q5JXM2 366 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 MCTP1Q6DN14 999 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 YY1AP1Q9H869 796 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 CLRN2A0PK11 232 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 C19orf81C9J6K1 198 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 GRK4P32298 578 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 SNX17Q15036 470 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 MORN1Q5T089 497 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 PRAMEF18Q5VWM3 479 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 OTUD7AQ8TE49 926 aaPredicted RBP6.12□□□□□ -1.43
ZEB1-208ENST00000542815 ZNF384Q8TF68 577 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 SOCS4Q8WXH5 440 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 GDF15Q99988 308 aa6.12□□□□□ -1.43
ZEB1-208ENST00000542815 GTPBP4Q9BZE4 634 aaKnown RBP6.12□□□□□ -1.43
ZEB1-208ENST00000542815 TRIM6-TRIM34B2RNG4 842 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 F6X3S4 739 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 UQCRFS1P1P0C7P4 283 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 CCL5P13501 91 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 EN2P19622 333 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-208ENST00000542815 NASPP49321 788 aaPredicted RBP6.11□□□□□ -1.43
ZEB1-208ENST00000542815 NEK4P51957 841 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 PDE1AP54750 535 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 ATP2B3Q16720 1220 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 TATDN1Q6P1N9 297 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 TICAM2Q86XR7 235 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 LRRCC1Q9C099 1032 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 LDHBP07195 334 aaKnown RBP6.11□□□□□ -1.43
ZEB1-208ENST00000542815 LDHCP07864 332 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 PLCG2P16885 1265 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 GAS2L3Q86XJ1 694 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 CDAN1Q8IWY9 1227 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 MAF1Q9H063 256 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 OSBPL3Q9H4L5 887 aa6.11□□□□□ -1.43
ZEB1-208ENST00000542815 MYH4Q9Y623 1939 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms