RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 ERVK-7P63135 1459 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 ZNF862O60290 1169 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 LMNB1P20700 586 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 ZC3H6P61129 1189 aaKnown RBP12.17□□□□□ -0.46
MRPS35-204ENST00000542199 DUOXA2Q1HG44 320 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 KIAA0825Q8IV33 1275 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 TRIM42Q8IWZ5 723 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 THEMISQ8N1K5 641 aaPredicted RBP12.17□□□□□ -0.46
MRPS35-204ENST00000542199 GOLM1Q8NBJ4 401 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 ZNF296Q8WUU4 475 aaPredicted RBP12.17□□□□□ -0.46
MRPS35-204ENST00000542199 ARHGAP31Q2M1Z3 1444 aa12.17□□□□□ -0.46
MRPS35-204ENST00000542199 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.17□□□□□ -0.46
MRPS35-204ENST00000542199 LIG1P18858 919 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 PAK2Q13177 524 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.16□□□□□ -0.46
MRPS35-204ENST00000542199 ACAD11Q709F0 780 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
MRPS35-204ENST00000542199 SCARF2Q96GP6 870 aaPredicted RBP12.16□□□□□ -0.46
MRPS35-204ENST00000542199 MIR1-1HGQ9H1L0 117 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 CAPN10Q9HC96 672 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 KCNQ5Q9NR82 932 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 CACNA2D2Q9NY47 1150 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 UGGT1Q9NYU2 1555 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 ANKRD30AQ9BXX3 1397 aa12.16□□□□□ -0.46
MRPS35-204ENST00000542199 TRIM37O94972 964 aa12.15□□□□□ -0.46
MRPS35-204ENST00000542199 F13A1P00488 732 aa12.15□□□□□ -0.46
MRPS35-204ENST00000542199 NAALADL2Q58DX5 795 aa12.15□□□□□ -0.46
MRPS35-204ENST00000542199 KIAA1211Q6ZU35 1233 aa12.15□□□□□ -0.46
MRPS35-204ENST00000542199 ANKLE2Q86XL3 938 aa12.15□□□□□ -0.46
MRPS35-204ENST00000542199 EIF4EBP3O60516 100 aaPredicted RBP12.14□□□□□ -0.47
MRPS35-204ENST00000542199 SELPP16109 830 aa12.14□□□□□ -0.47
MRPS35-204ENST00000542199 CDK8P49336 464 aa12.14□□□□□ -0.47
MRPS35-204ENST00000542199 AGGF1Q8N302 714 aaeCLIP12.14□□□□□ -0.47
MRPS35-204ENST00000542199 FBXO27Q8NI29 283 aa12.14□□□□□ -0.47
MRPS35-204ENST00000542199 DCAF11Q8TEB1 546 aa12.14□□□□□ -0.47
MRPS35-204ENST00000542199 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
MRPS35-204ENST00000542199 MED14O60244 1454 aa12.14□□□□□ -0.47
MRPS35-204ENST00000542199 ADGRL2O95490 1459 aa12.14□□□□□ -0.47
MRPS35-204ENST00000542199 DEPDC5O75140 1603 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 SPATA31C1P0DKV0 1188 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 CRKP46108 304 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 IGF2-ASQ6U949 168 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.13□□□□□ -0.47
MRPS35-204ENST00000542199 ACSBG1Q96GR2 724 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 WDR18Q9BV38 432 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 KRT82Q9NSB4 513 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 UBP1Q9NZI7 540 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 INPP5FQ9Y2H2 1132 aa12.13□□□□□ -0.47
MRPS35-204ENST00000542199 SUPT16HQ9Y5B9 1047 aaKnown RBP12.13□□□□□ -0.47
MRPS35-204ENST00000542199 GREM1O60565 184 aa12.12□□□□□ -0.47
MRPS35-204ENST00000542199 RUSC1Q9BVN2 902 aa12.12□□□□□ -0.47
MRPS35-204ENST00000542199 MRPL18Q9H0U6 180 aaKnown RBP12.12□□□□□ -0.47
MRPS35-204ENST00000542199 LMTK2Q8IWU2 1503 aa12.11□□□□□ -0.47
MRPS35-204ENST00000542199 VWDEQ8N2E2 1590 aa12.11□□□□□ -0.47
MRPS35-204ENST00000542199 KANK1Q14678 1352 aa12.11□□□□□ -0.47
MRPS35-204ENST00000542199 FAM221AA4D161 298 aa12.11□□□□□ -0.47
MRPS35-204ENST00000542199 TLR3O15455 904 aaKnown RBP12.11□□□□□ -0.47
MRPS35-204ENST00000542199 FAM196AQ6ZSG2 479 aa12.11□□□□□ -0.47
MRPS35-204ENST00000542199 PCDHA4Q9UN74 947 aa12.11□□□□□ -0.47
MRPS35-204ENST00000542199 NPHP4O75161 1426 aaPredicted RBP12.11□□□□□ -0.47
MRPS35-204ENST00000542199 FAM50AQ14320 339 aaKnown RBP12.1□□□□□ -0.47
MRPS35-204ENST00000542199 GATAD2BQ8WXI9 593 aa12.1□□□□□ -0.47
MRPS35-204ENST00000542199 GPRASP2Q96D09 838 aa12.1□□□□□ -0.47
MRPS35-204ENST00000542199 TMPRSS13Q9BYE2 586 aa12.1□□□□□ -0.47
MRPS35-204ENST00000542199 CEP152O94986 1710 aa12.1□□□□□ -0.47
MRPS35-204ENST00000542199 POLR1AO95602 1720 aaPredicted RBP12.1□□□□□ -0.47
MRPS35-204ENST00000542199 AOC2O75106 756 aa12.09□□□□□ -0.47
MRPS35-204ENST00000542199 ALX3O95076 343 aa12.09□□□□□ -0.47
MRPS35-204ENST00000542199 GJA8P48165 433 aa12.09□□□□□ -0.47
MRPS35-204ENST00000542199 KIF4BQ2VIQ3 1234 aa12.09□□□□□ -0.47
MRPS35-204ENST00000542199 CPS1P31327 1500 aa12.09□□□□□ -0.47
MRPS35-204ENST00000542199 ARHGAP23Q9P227 1491 aa12.08□□□□□ -0.47
MRPS35-204ENST00000542199 F8W735 103 aaPredicted RBP12.08□□□□□ -0.48
MRPS35-204ENST00000542199 CILPO75339 1184 aa12.08□□□□□ -0.48
MRPS35-204ENST00000542199 INPP5AQ14642 412 aa12.08□□□□□ -0.48
MRPS35-204ENST00000542199 CCDC84Q86UT8 332 aaPredicted RBP12.08□□□□□ -0.48
MRPS35-204ENST00000542199 NT5C1AQ9BXI3 368 aa12.08□□□□□ -0.48
MRPS35-204ENST00000542199 USP21Q9UK80 565 aa12.08□□□□□ -0.48
MRPS35-204ENST00000542199 PCDHGC5Q9Y5F6 944 aa12.08□□□□□ -0.48
MRPS35-204ENST00000542199 ANKRD50Q9ULJ7 1429 aa12.08□□□□□ -0.48
MRPS35-204ENST00000542199 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
MRPS35-204ENST00000542199 AKAP4Q5JQC9 854 aa12.07□□□□□ -0.48
MRPS35-204ENST00000542199 EXOSC6Q5RKV6 272 aaKnown RBP12.07□□□□□ -0.48
MRPS35-204ENST00000542199 SCARA3Q6AZY7 606 aa12.07□□□□□ -0.48
MRPS35-204ENST00000542199 LRFN4Q6PJG9 635 aa12.07□□□□□ -0.48
MRPS35-204ENST00000542199 PLPPR2Q96GM1 343 aa12.07□□□□□ -0.48
MRPS35-204ENST00000542199 RNF208Q9H0X6 261 aa12.07□□□□□ -0.48
MRPS35-204ENST00000542199 SLIT1O75093 1534 aa12.06□□□□□ -0.48
MRPS35-204ENST00000542199 NOS1P29475 1434 aa12.06□□□□□ -0.48
MRPS35-204ENST00000542199 DCDC2CA8MYV0 355 aa12.06□□□□□ -0.48
MRPS35-204ENST00000542199 LTKP29376 864 aa12.06□□□□□ -0.48
MRPS35-204ENST00000542199 WIPI1Q5MNZ9 446 aaPredicted RBP12.06□□□□□ -0.48
MRPS35-204ENST00000542199 HP1BP3Q5SSJ5 553 aaPredicted RBP12.06□□□□□ -0.48
MRPS35-204ENST00000542199 LENG1Q96BZ8 264 aaPredicted RBP12.06□□□□□ -0.48
MRPS35-204ENST00000542199 RAD18Q9NS91 495 aa12.06□□□□□ -0.48
MRPS35-204ENST00000542199 SCAF11Q99590 1463 aaKnown RBP12.06□□□□□ -0.48
MRPS35-204ENST00000542199 EFCAB6Q5THR3 1501 aa12.06□□□□□ -0.48
MRPS35-204ENST00000542199 UBR1Q8IWV7 1749 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms