RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
SCARB1-207ENST00000541661 HERVK_113P62684 666 aa16.07■□□□□ 0.16
SCARB1-207ENST00000541661 IRX3P78415 501 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-207ENST00000541661 GPRC5AQ8NFJ5 357 aa16.07■□□□□ 0.16
SCARB1-207ENST00000541661 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
SCARB1-207ENST00000541661 TRIB2Q92519 343 aa16.07■□□□□ 0.16
SCARB1-207ENST00000541661 ZNF512BQ96KM6 892 aaPredicted RBP16.07■□□□□ 0.16
SCARB1-207ENST00000541661 TXNRD2Q9NNW7 524 aa16.07■□□□□ 0.16
SCARB1-207ENST00000541661 FLT1P17948 1338 aa16.07■□□□□ 0.16
SCARB1-207ENST00000541661 CYP2E1P05181 493 aaPredicted RBP16.06■□□□□ 0.16
SCARB1-207ENST00000541661 POLA2Q14181 598 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 TNNI3KQ59H18 835 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 CCDC158Q5M9N0 1113 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 TTC39AQ5SRH9 613 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 GPR153Q6NV75 609 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 MAPKAPK5Q8IW41 473 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 TRMT44Q8IYL2 757 aaKnown RBP16.06■□□□□ 0.16
SCARB1-207ENST00000541661 C7orf61Q8IZ16 206 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 USP6NLQ92738 828 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 LRCH3Q96II8 777 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 RBPJLQ9UBG7 517 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 TNNQ9UQP3 1299 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 FPGT-TNNI3KV9GXZ4 949 aa16.06■□□□□ 0.16
SCARB1-207ENST00000541661 CYP2B6P20813 491 aa16.05■□□□□ 0.16
SCARB1-207ENST00000541661 MAPK4P31152 587 aa16.05■□□□□ 0.16
SCARB1-207ENST00000541661 SSH3Q8TE77 659 aa16.05■□□□□ 0.16
SCARB1-207ENST00000541661 GTF3C2Q8WUA4 911 aaPredicted RBP16.05■□□□□ 0.16
SCARB1-207ENST00000541661 SOCS4Q8WXH5 440 aa16.05■□□□□ 0.16
SCARB1-207ENST00000541661 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
SCARB1-207ENST00000541661 PALD1Q9ULE6 856 aa16.05■□□□□ 0.16
SCARB1-207ENST00000541661 BCAR3O75815 825 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
SCARB1-207ENST00000541661 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 ERVK-24P63145 666 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-207ENST00000541661 Q3C1V9 767 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 CRACR2BQ8N4Y2 399 aaPredicted RBP16.04■□□□□ 0.16
SCARB1-207ENST00000541661 EMILIN3Q9NT22 766 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 ZBTB21Q9ULJ3 1066 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 MYH1P12882 1939 aa16.04■□□□□ 0.16
SCARB1-207ENST00000541661 PEX10O60683 326 aa16.03■□□□□ 0.16
SCARB1-207ENST00000541661 MORN1Q5T089 497 aa16.03■□□□□ 0.16
SCARB1-207ENST00000541661 POTEEQ6S8J3 1075 aa16.03■□□□□ 0.16
SCARB1-207ENST00000541661 SLC17A8Q8NDX2 589 aa16.03■□□□□ 0.16
SCARB1-207ENST00000541661 FRAT1Q92837 279 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-207ENST00000541661 TRIM34Q9BYJ4 488 aa16.03■□□□□ 0.16
SCARB1-207ENST00000541661 ZMYND8Q9ULU4 1186 aaPredicted RBP16.03■□□□□ 0.16
SCARB1-207ENST00000541661 PFASO15067 1338 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 CCER2I3L3R5 266 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 GDF11O95390 407 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 HLA-DOAP06340 250 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 COL6A1P12109 1028 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 ZAP70P43403 619 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 CACNB2Q08289 660 aaPredicted RBP16.02■□□□□ 0.16
SCARB1-207ENST00000541661 PDE3AQ14432 1141 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 LHX8Q68G74 356 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 TATDN1Q6P1N9 297 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 USP17L2Q6R6M4 530 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 CLUAP1Q96AJ1 413 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 C12orf42Q96LP6 360 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 PORCNQ9H237 461 aa16.02■□□□□ 0.16
SCARB1-207ENST00000541661 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
SCARB1-207ENST00000541661 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-207ENST00000541661 RGS2P41220 211 aa16.01■□□□□ 0.15
SCARB1-207ENST00000541661 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
SCARB1-207ENST00000541661 DYNLL1P63167 89 aaKnown RBP16.01■□□□□ 0.15
SCARB1-207ENST00000541661 PLEKHH3Q7Z736 793 aa16.01■□□□□ 0.15
SCARB1-207ENST00000541661 CERS3Q8IU89 383 aa16.01■□□□□ 0.15
SCARB1-207ENST00000541661 TMEM57Q8N5G2 664 aa16.01■□□□□ 0.15
SCARB1-207ENST00000541661 SAP30BPQ9UHR5 308 aaKnown RBP16.01■□□□□ 0.15
SCARB1-207ENST00000541661 NOP58Q9Y2X3 529 aaKnown RBP16.01■□□□□ 0.15
SCARB1-207ENST00000541661 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
SCARB1-207ENST00000541661 SYN1P17600 705 aa16■□□□□ 0.15
SCARB1-207ENST00000541661 CYP7A1P22680 504 aa16■□□□□ 0.15
SCARB1-207ENST00000541661 OS9Q13438 667 aaPredicted RBP16■□□□□ 0.15
SCARB1-207ENST00000541661 CCAR1Q8IX12 1150 aaKnown RBP16■□□□□ 0.15
SCARB1-207ENST00000541661 TDHQ8IZJ6 230 aa16■□□□□ 0.15
SCARB1-207ENST00000541661 DBNLQ9UJU6 430 aaKnown RBP16■□□□□ 0.15
SCARB1-207ENST00000541661 RABGAP1Q9Y3P9 1069 aa16■□□□□ 0.15
SCARB1-207ENST00000541661 FRMPD3Q5JV73 1810 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L15C9J2P7 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L13C9JLJ4 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L11C9JVI0 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L18D6R9N7 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L22D6RA61 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L17D6RBQ6 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L19D6RCP7 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L20D6RJB6 530 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 DLL1O00548 723 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 CNMDO75829 334 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 GH2P01242 217 aa15.99■□□□□ 0.15
SCARB1-207ENST00000541661 CCND3P30281 292 aaPredicted RBP15.99■□□□□ 0.15
SCARB1-207ENST00000541661 USP17L24Q0WX57 530 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms