RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 TBC1D2Q9BYX2 928 aa23.19■■□□□ 1.3
DDX55-207ENST00000540763 GREB1LQ9C091 1923 aaPredicted RBP23.19■■□□□ 1.3
DDX55-207ENST00000540763 SHMT1P34896 483 aa23.18■■□□□ 1.3
DDX55-207ENST00000540763 PPIL2Q13356 520 aa23.18■■□□□ 1.3
DDX55-207ENST00000540763 OPTNQ96CV9 577 aa23.18■■□□□ 1.3
DDX55-207ENST00000540763 PICK1Q9NRD5 415 aa23.18■■□□□ 1.3
DDX55-207ENST00000540763 SGSM2O43147 1006 aa23.17■■□□□ 1.3
DDX55-207ENST00000540763 ASNSP08243 561 aa23.17■■□□□ 1.3
DDX55-207ENST00000540763 CYP2D7A0A087X1C5 515 aa23.16■■□□□ 1.3
DDX55-207ENST00000540763 PTPRAP18433 802 aa23.16■■□□□ 1.3
DDX55-207ENST00000540763 ZNF287Q9HBT7 754 aa23.16■■□□□ 1.3
DDX55-207ENST00000540763 ANAPC4Q9UJX5 808 aa23.16■■□□□ 1.3
DDX55-207ENST00000540763 MANSC4A6NHS7 340 aaPredicted RBP23.15■■□□□ 1.3
DDX55-207ENST00000540763 CDC45O75419 566 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 SLC3A2P08195 630 aaKnown RBP23.15■■□□□ 1.3
DDX55-207ENST00000540763 GJA5P36382 358 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 CDK8P49336 464 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 EVX2Q03828 476 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 PPARAQ07869 468 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 RRP1BQ14684 758 aaKnown RBP23.15■■□□□ 1.3
DDX55-207ENST00000540763 CERKLQ49MI3 558 aaPredicted RBP23.15■■□□□ 1.3
DDX55-207ENST00000540763 CASC1Q6TDU7 716 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 OTUD5Q96G74 571 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 CCDC17Q96LX7 622 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 IL25Q9H293 177 aa23.15■■□□□ 1.3
DDX55-207ENST00000540763 LOC285556D6RIA3 1793 aa23.14■■□□□ 1.3
DDX55-207ENST00000540763 MINDY4BA8MYZ0 360 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 AOC2O75106 756 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 FGAP02671 866 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 INHBEP58166 350 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 DYNLL2Q96FJ2 89 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 ABHD8Q96I13 439 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 ZBTB21Q9ULJ3 1066 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 KCNH4Q9UQ05 1017 aa23.14■■□□□ 1.29
DDX55-207ENST00000540763 SREBF2Q12772 1141 aa23.13■■□□□ 1.29
DDX55-207ENST00000540763 SLC44A5Q8NCS7 719 aa23.13■■□□□ 1.29
DDX55-207ENST00000540763 USP17L5A8MUK1 530 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 GTF2A2P52657 109 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 KIF23Q02241 960 aaPredicted RBP23.12■■□□□ 1.29
DDX55-207ENST00000540763 PDE4BQ07343 736 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 ABCB5Q2M3G0 1257 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 CNKSR2Q8WXI2 1034 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 ESYT1Q9BSJ8 1104 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 AS3MTQ9HBK9 375 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 CABP5Q9NP86 173 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 CTNNA3Q9UI47 895 aa23.12■■□□□ 1.29
DDX55-207ENST00000540763 TESPA1A2RU30 521 aaPredicted RBP23.11■■□□□ 1.29
DDX55-207ENST00000540763 SMIM22K7EJ46 135 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 CXCL11O14625 94 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 IRF6O14896 467 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 CA12O43570 354 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 GDF11O95390 407 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 PCP11498 1178 aaKnown RBP23.11■■□□□ 1.29
DDX55-207ENST00000540763 SNAPC2Q13487 334 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 AFG3L2Q9Y4W6 797 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 ZHX2Q9Y6X8 837 aa23.11■■□□□ 1.29
DDX55-207ENST00000540763 GH2P01242 217 aa23.1■■□□□ 1.29
DDX55-207ENST00000540763 TM4SF4P48230 202 aa23.1■■□□□ 1.29
DDX55-207ENST00000540763 NT5C2P49902 561 aa23.1■■□□□ 1.29
DDX55-207ENST00000540763 TMEM179Q6ZVK1 233 aa23.1■■□□□ 1.29
DDX55-207ENST00000540763 MS4A4AQ96JQ5 239 aa23.1■■□□□ 1.29
DDX55-207ENST00000540763 ZIC5Q96T25 663 aa23.1■■□□□ 1.29
DDX55-207ENST00000540763 WDR18Q9BV38 432 aa23.1■■□□□ 1.29
DDX55-207ENST00000540763 FGRP09769 529 aa23.09■■□□□ 1.29
DDX55-207ENST00000540763 CETPP11597 493 aa23.09■■□□□ 1.29
DDX55-207ENST00000540763 JAG1P78504 1218 aa23.09■■□□□ 1.29
DDX55-207ENST00000540763 MKRN3Q13064 507 aaKnown RBP23.09■■□□□ 1.29
DDX55-207ENST00000540763 MKNK2Q9HBH9 465 aa23.09■■□□□ 1.29
DDX55-207ENST00000540763 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.09■■□□□ 1.29
DDX55-207ENST00000540763 TSKSQ9UJT2 592 aa23.09■■□□□ 1.29
DDX55-207ENST00000540763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.09■■□□□ 1.29
DDX55-207ENST00000540763 PLIN4Q96Q06 1357 aa23.09■■□□□ 1.29
DDX55-207ENST00000540763 RASA1P20936 1047 aa23.08■■□□□ 1.29
DDX55-207ENST00000540763 ZNF280CQ8ND82 737 aa23.08■■□□□ 1.29
DDX55-207ENST00000540763 MYH4Q9Y623 1939 aa23.08■■□□□ 1.28
DDX55-207ENST00000540763 A0A0G2JLL6 359 aaPredicted RBP23.07■■□□□ 1.28
DDX55-207ENST00000540763 ZNF213O14771 459 aa23.07■■□□□ 1.28
DDX55-207ENST00000540763 ORC4O43929 436 aa23.07■■□□□ 1.28
DDX55-207ENST00000540763 IMMTQ16891 758 aaKnown RBP23.07■■□□□ 1.28
DDX55-207ENST00000540763 KIAA1211Q6ZU35 1233 aa23.07■■□□□ 1.28
DDX55-207ENST00000540763 PRRT2Q7Z6L0 340 aaPredicted RBP23.07■■□□□ 1.28
DDX55-207ENST00000540763 ZCCHC17Q9NP64 241 aaKnown RBP23.07■■□□□ 1.28
DDX55-207ENST00000540763 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.07■■□□□ 1.28
DDX55-207ENST00000540763 U3KPZ7 1027 aaPredicted RBP23.07■■□□□ 1.28
DDX55-207ENST00000540763 AKR1B1P15121 316 aa23.06■■□□□ 1.28
DDX55-207ENST00000540763 GUCY1A2P33402 732 aa23.06■■□□□ 1.28
DDX55-207ENST00000540763 SHROOM1Q2M3G4 852 aaPredicted RBP23.06■■□□□ 1.28
DDX55-207ENST00000540763 ZNF444Q8N0Y2 327 aaPredicted RBP23.06■■□□□ 1.28
DDX55-207ENST00000540763 STAG1Q8WVM7 1258 aa23.06■■□□□ 1.28
DDX55-207ENST00000540763 MAP4K1Q92918 833 aa23.06■■□□□ 1.28
DDX55-207ENST00000540763 RNF41Q9H4P4 317 aaPredicted RBP23.06■■□□□ 1.28
DDX55-207ENST00000540763 CASP8AP2Q9UKL3 1982 aa23.06■■□□□ 1.28
DDX55-207ENST00000540763 CCL15-CCL14A0A0B4J2E2 113 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 MPHOSPH10O00566 681 aaKnown RBP23.05■■□□□ 1.28
DDX55-207ENST00000540763 ALDH1A1P00352 501 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 PTH1RQ03431 593 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 CTDSPL2Q05D32 466 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 RAB3GAP1Q15042 981 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 CCL15Q16663 113 aa23.05■■□□□ 1.28
DDX55-207ENST00000540763 SH3D19Q5HYK7 790 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms