RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 STK36Q9NRP7 1315 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 RBM6P78332 1123 aaKnown RBP13.27□□□□□ -0.29
C11orf54-214ENST00000540113 GOLGA8FQ08AF8 430 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 GOLGA8DPQ0D2H9 430 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 ARMCX5Q6P1M9 558 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 FBXO33Q7Z6M2 555 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.29
C11orf54-214ENST00000540113 PDILTQ8N807 584 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 FANCBQ8NB91 859 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 UBAC1Q9BSL1 405 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 KCNH3Q9ULD8 1083 aa13.27□□□□□ -0.29
C11orf54-214ENST00000540113 SBF2Q86WG5 1849 aa13.26□□□□□ -0.29
C11orf54-214ENST00000540113 MYH2Q9UKX2 1941 aa13.26□□□□□ -0.29
C11orf54-214ENST00000540113 PDE4BQ07343 736 aa13.26□□□□□ -0.29
C11orf54-214ENST00000540113 SART3Q15020 963 aaKnown RBP13.26□□□□□ -0.29
C11orf54-214ENST00000540113 NBPF5PQ86XG9 351 aaPredicted RBP13.26□□□□□ -0.29
C11orf54-214ENST00000540113 CNNM3Q8NE01 707 aa13.26□□□□□ -0.29
C11orf54-214ENST00000540113 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
C11orf54-214ENST00000540113 CCNL1Q9UK58 526 aaPredicted RBP13.26□□□□□ -0.29
C11orf54-214ENST00000540113 PCDHA5Q9Y5H7 936 aa13.26□□□□□ -0.29
C11orf54-214ENST00000540113 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 RPS8P62241 208 aaKnown RBP13.25□□□□□ -0.29
C11orf54-214ENST00000540113 FANCCQ00597 558 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 CAVIN4Q5BKX8 364 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 USP49Q70CQ1 688 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 TRIM22Q8IYM9 498 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 JMYQ8N9B5 988 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 NYXQ9GZU5 481 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 QTRT2Q9H974 415 aaKnown RBP13.25□□□□□ -0.29
C11orf54-214ENST00000540113 CABP5Q9NP86 173 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 VPS54Q9P1Q0 977 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 ANAPC4Q9UJX5 808 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 CUTAO60888 179 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 BMP6P22004 513 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 ZNF827Q17R98 1081 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 NOM1Q5C9Z4 860 aaKnown RBP13.25□□□□□ -0.29
C11orf54-214ENST00000540113 EARS2Q5JPH6 523 aaKnown RBP13.25□□□□□ -0.29
C11orf54-214ENST00000540113 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
C11orf54-214ENST00000540113 ARHGEF1Q92888 912 aaKnown RBP13.25□□□□□ -0.29
C11orf54-214ENST00000540113 MAP7D2Q96T17 732 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 BPIFA3Q9BQP9 254 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 TUBE1Q9UJT0 475 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 MAST2Q6P0Q8 1798 aa13.25□□□□□ -0.29
C11orf54-214ENST00000540113 NMT2O60551 498 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 PLEKHA8P1O95397 391 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 TM4SF1P30408 202 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 SAFBQ15424 915 aaKnown RBP eCLIP13.24□□□□□ -0.29
C11orf54-214ENST00000540113 GLIPR1L2Q4G1C9 344 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 NLRP3Q96P20 1036 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 SERTAD1Q9UHV2 236 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 DLEC1Q9Y238 1755 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 TMEM232C9JQI7 657 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 POLR2DO15514 142 aaKnown RBP13.24□□□□□ -0.29
C11orf54-214ENST00000540113 ZPR1O75312 459 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 SEC23AQ15436 765 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 ENAHQ8N8S7 591 aaPredicted RBP13.24□□□□□ -0.29
C11orf54-214ENST00000540113 TIGD1Q96MW7 591 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 RNF41Q9H4P4 317 aaPredicted RBP13.24□□□□□ -0.29
C11orf54-214ENST00000540113 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.24□□□□□ -0.29
C11orf54-214ENST00000540113 FBXO2Q9UK22 296 aaPredicted RBP13.24□□□□□ -0.29
C11orf54-214ENST00000540113 V9GYY5 206 aaPredicted RBP13.24□□□□□ -0.29
C11orf54-214ENST00000540113 LAMB1P07942 1786 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 IRS2Q9Y4H2 1338 aa13.24□□□□□ -0.29
C11orf54-214ENST00000540113 SMTNL1A8MU46 457 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 WNT7AO00755 349 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 DEXIO95424 95 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 PTPN14Q15678 1187 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 PPP4R3BQ5MIZ7 849 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 CCAR2Q8N163 923 aaKnown RBP13.23□□□□□ -0.29
C11orf54-214ENST00000540113 WASF1Q92558 559 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 MTA3Q9BTC8 594 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.23□□□□□ -0.29
C11orf54-214ENST00000540113 FANCLQ9NW38 375 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 RTCBQ9Y3I0 505 aaKnown RBP13.23□□□□□ -0.29
C11orf54-214ENST00000540113 MYH6P13533 1939 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 SERPINC1P01008 464 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 TXNRD3Q86VQ6 643 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 ESR2Q92731 530 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 NSUN4Q96CB9 384 aaKnown RBP13.23□□□□□ -0.29
C11orf54-214ENST00000540113 BRIP1Q9BX63 1249 aa13.23□□□□□ -0.29
C11orf54-214ENST00000540113 AATFQ9NY61 560 aaKnown RBP eCLIP13.23□□□□□ -0.29
C11orf54-214ENST00000540113 BAZ2BQ9UIF8 2168 aaKnown RBP13.23□□□□□ -0.29
C11orf54-214ENST00000540113 KIAA1551Q9HCM1 1747 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 USP17L12C9JPN9 530 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 USP17L21D6R901 530 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 CTIFO43310 598 aaKnown RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 NEMFO60524 1076 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 CYP2D6P10635 497 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 CASP1P29466 404 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 TPM4P67936 248 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 MECOMQ03112 1051 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 NCBP1Q09161 790 aaKnown RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 FAM47AQ5JRC9 791 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 TRMT44Q8IYL2 757 aaKnown RBP13.22□□□□□ -0.29
C11orf54-214ENST00000540113 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
C11orf54-214ENST00000540113 ZSCAN10Q96SZ4 725 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms