RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RRP15Q9Y3B9 282 aaKnown RBP14.45□□□□□ -0.1
DDX55-206ENST00000539934 MAP3K15Q6ZN16 1313 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 TIMM44O43615 452 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 NEBLO76041 1014 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 EPS15P42566 896 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 RFX5P48382 616 aaPredicted RBP14.44□□□□□ -0.1
DDX55-206ENST00000539934 PTPN12Q05209 780 aaKnown RBP14.44□□□□□ -0.1
DDX55-206ENST00000539934 GJC2Q5T442 439 aaPredicted RBP14.44□□□□□ -0.1
DDX55-206ENST00000539934 SOGA3Q5TF21 947 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 TEX11Q8IYF3 940 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 GPR101Q96P66 508 aaPredicted RBP14.44□□□□□ -0.1
DDX55-206ENST00000539934 ESYT1Q9BSJ8 1104 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 TMOD4Q9NZQ9 345 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 NIP7Q9Y221 180 aaKnown RBP eCLIP14.44□□□□□ -0.1
DDX55-206ENST00000539934 CENPFP49454 3210 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 ANKRD36CQ5JPF3 1778 aa14.44□□□□□ -0.1
DDX55-206ENST00000539934 CASP8AP2Q9UKL3 1982 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 IARSP41252 1262 aaKnown RBP14.43□□□□□ -0.1
DDX55-206ENST00000539934 EAF2Q96CJ1 260 aaPredicted RBP14.43□□□□□ -0.1
DDX55-206ENST00000539934 STK10O94804 968 aaKnown RBP14.43□□□□□ -0.1
DDX55-206ENST00000539934 NPR1P16066 1061 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 PRPHP41219 470 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 FOXO4P98177 505 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 HHATQ5VTY9 493 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 PNMA8AQ86V59 439 aaPredicted RBP14.43□□□□□ -0.1
DDX55-206ENST00000539934 IQUBQ8NA54 791 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 MORC4Q8TE76 937 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 BEGAINQ9BUH8 593 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 CCDC8Q9H0W5 538 aaPredicted RBP14.43□□□□□ -0.1
DDX55-206ENST00000539934 JADE2Q9NQC1 790 aa14.43□□□□□ -0.1
DDX55-206ENST00000539934 TPX2Q9ULW0 747 aaKnown RBP14.43□□□□□ -0.1
DDX55-206ENST00000539934 NUP98P52948 1817 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 SNUPNO95149 360 aaKnown RBP14.42□□□□□ -0.1
DDX55-206ENST00000539934 CST9Q5W186 159 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 GIGYF2Q6Y7W6 1299 aaKnown RBP14.42□□□□□ -0.1
DDX55-206ENST00000539934 SNX21Q969T3 373 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 SPTLC3Q9NUV7 552 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.42□□□□□ -0.1
DDX55-206ENST00000539934 FZD9O00144 591 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 SH3BP5O60239 455 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 SPRYD3Q8NCJ5 442 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 SYAP1Q96A49 352 aaPredicted RBP14.42□□□□□ -0.1
DDX55-206ENST00000539934 LCMT1Q9UIC8 334 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 COL4A5P29400 1685 aa14.42□□□□□ -0.1
DDX55-206ENST00000539934 NCBP1Q09161 790 aaKnown RBP14.41□□□□□ -0.1
DDX55-206ENST00000539934 TRIM28Q13263 835 aaKnown RBP14.41□□□□□ -0.1
DDX55-206ENST00000539934 HLFQ16534 295 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 TRAIPQ9BWF2 469 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 ANO2Q9NQ90 1003 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 A1CFQ9NQ94 594 aaKnown RBP14.41□□□□□ -0.1
DDX55-206ENST00000539934 ADAMTSL1Q8N6G6 1762 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 SHTN1A0MZ66 631 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 GPC2Q8N158 579 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 MICAL1Q8TDZ2 1067 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 JDP2Q8WYK2 163 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 YIPF2Q9BWQ6 316 aa14.41□□□□□ -0.1
DDX55-206ENST00000539934 ZSCAN9O15535 394 aaPredicted RBP14.4□□□□□ -0.1
DDX55-206ENST00000539934 BAG4O95429 457 aaKnown RBP14.4□□□□□ -0.1
DDX55-206ENST00000539934 GPTP24298 496 aa14.4□□□□□ -0.1
DDX55-206ENST00000539934 RMDN2Q96LZ7 410 aa14.4□□□□□ -0.1
DDX55-206ENST00000539934 TRIM6Q9C030 488 aaPredicted RBP14.4□□□□□ -0.1
DDX55-206ENST00000539934 BRCA2P51587 3418 aa14.4□□□□□ -0.1
DDX55-206ENST00000539934 LTBP1Q14766 1721 aa14.4□□□□□ -0.1
DDX55-206ENST00000539934 UNCXA6NJT0 531 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 NAT2P11245 290 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 VCAM1P19320 739 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 SCNN1DP51172 638 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 TFCP2Q12800 502 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 TPTE2Q6XPS3 522 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 ANKRD13BQ86YJ7 626 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 RTKN2Q8IZC4 609 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 STAG2Q8N3U4 1231 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 PRPF38AQ8NAV1 312 aaKnown RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 RNF214Q8ND24 703 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 CCDC34Q96HJ3 373 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 TLR7Q9NYK1 1049 aaKnown RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 CTDP1Q9Y5B0 961 aaPredicted RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 PCCAP05165 728 aaPredicted RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 RDXP35241 583 aaKnown RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 TMED1Q13445 227 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 TNNI3KQ59H18 835 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 TEX35Q5T0J7 233 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 ZBTB38Q8NAP3 1195 aaPredicted RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 ARMC2Q8NEN0 867 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 BICD1Q96G01 975 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 FAM89AQ96GI7 184 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 FAM163AQ96GL9 167 aaPredicted RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 GNL3LQ9NVN8 582 aaKnown RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 IQSEC3Q9UPP2 1182 aaPredicted RBP14.39□□□□□ -0.11
DDX55-206ENST00000539934 FPGT-TNNI3KV9GXZ4 949 aa14.39□□□□□ -0.11
DDX55-206ENST00000539934 CREB3O43889 395 aa14.38□□□□□ -0.11
DDX55-206ENST00000539934 CCDC175P0C221 793 aa14.38□□□□□ -0.11
DDX55-206ENST00000539934 USP8P40818 1118 aa14.38□□□□□ -0.11
DDX55-206ENST00000539934 ZNF445P59923 1031 aa14.38□□□□□ -0.11
DDX55-206ENST00000539934 HDLBPQ00341 1268 aaKnown RBP14.38□□□□□ -0.11
DDX55-206ENST00000539934 DLK2Q6UY11 383 aa14.38□□□□□ -0.11
DDX55-206ENST00000539934 TRIM7Q9C029 511 aa14.38□□□□□ -0.11
DDX55-206ENST00000539934 MCOLN1Q9GZU1 580 aa14.38□□□□□ -0.11
DDX55-206ENST00000539934 METTL14Q9HCE5 456 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms