RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 HSP90AB3PQ58FF7 597 aa6.68□□□□□ -1.34
CELF1-220ENST00000539455 SIRT2Q8IXJ6 389 aa6.68□□□□□ -1.34
CELF1-220ENST00000539455 TEPSINQ96N21 525 aa6.68□□□□□ -1.34
CELF1-220ENST00000539455 PARK7Q99497 189 aaKnown RBP6.68□□□□□ -1.34
CELF1-220ENST00000539455 SENP6Q9GZR1 1112 aaPredicted RBP6.68□□□□□ -1.34
CELF1-220ENST00000539455 CWC25Q9NXE8 425 aaPredicted RBP6.68□□□□□ -1.34
CELF1-220ENST00000539455 C9orf78Q9NZ63 289 aaPredicted RBP6.68□□□□□ -1.34
CELF1-220ENST00000539455 UTYO14607 1347 aa6.68□□□□□ -1.34
CELF1-220ENST00000539455 NCOR2Q9Y618 2525 aa6.68□□□□□ -1.34
CELF1-220ENST00000539455 PSME4Q14997 1843 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 MYO9BQ13459 2157 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 GRXCR1A8MXD5 290 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 ID4P47928 161 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 TRIM28Q13263 835 aaKnown RBP6.67□□□□□ -1.34
CELF1-220ENST00000539455 HDAC1Q13547 482 aaPredicted RBP6.67□□□□□ -1.34
CELF1-220ENST00000539455 MFSD10Q14728 455 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 RTL5Q5HYW3 569 aaPredicted RBP6.67□□□□□ -1.34
CELF1-220ENST00000539455 MAP3K21Q5TCX8 1036 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 LHX8Q68G74 356 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 CEP85Q6P2H3 762 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 UBE3BQ7Z3V4 1068 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 ANKRD44Q8N8A2 993 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 CCDC191Q8NCU4 936 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 COA7Q96BR5 231 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 KAZALD1Q96I82 304 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 SUCLG2Q96I99 432 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 PBX4Q9BYU1 374 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 PRDM5Q9NQX1 630 aaPredicted RBP6.67□□□□□ -1.34
CELF1-220ENST00000539455 KCNH4Q9UQ05 1017 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 ATP11BQ9Y2G3 1177 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 TPRP12270 2363 aaKnown RBP6.67□□□□□ -1.34
CELF1-220ENST00000539455 LRRC37A2A6NM11 1700 aa6.67□□□□□ -1.34
CELF1-220ENST00000539455 PTPRZ1P23471 2315 aaPredicted RBP6.66□□□□□ -1.34
CELF1-220ENST00000539455 PNMA6EA0A0J9YXQ4 647 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 H7C1W4 665 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 MYO1BO43795 1136 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 ATP2B4P23634 1241 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 PTPN5P54829 565 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 CASP7P55210 303 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 CFAP100Q494V2 611 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 EPHA10Q5JZY3 1008 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 TTLL5Q6EMB2 1281 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 GPAT2Q6NUI2 795 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 CENPQQ7L2Z9 268 aaPredicted RBP6.66□□□□□ -1.34
CELF1-220ENST00000539455 SH3RF1Q7Z6J0 888 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 RPAP2Q8IXW5 612 aaPredicted RBP6.66□□□□□ -1.34
CELF1-220ENST00000539455 TRIB2Q92519 343 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 ZKSCAN4Q969J2 545 aaPredicted RBP6.66□□□□□ -1.34
CELF1-220ENST00000539455 PRMT6Q96LA8 375 aaPredicted RBP6.66□□□□□ -1.34
CELF1-220ENST00000539455 RWDD1Q9H446 243 aaPredicted RBP6.66□□□□□ -1.34
CELF1-220ENST00000539455 BICC1Q9H694 974 aaKnown RBP6.66□□□□□ -1.34
CELF1-220ENST00000539455 PDLIM7Q9NR12 457 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 XDHP47989 1333 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 MAST2Q6P0Q8 1798 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 MED23Q9ULK4 1368 aa6.66□□□□□ -1.34
CELF1-220ENST00000539455 ANKRD11Q6UB99 2663 aaPredicted RBP6.65□□□□□ -1.34
CELF1-220ENST00000539455 TRIM43BA6NCK2 446 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 PCCAP05165 728 aaPredicted RBP6.65□□□□□ -1.34
CELF1-220ENST00000539455 ATP8B2P98198 1209 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 PPATQ06203 517 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 HFE2Q6ZVN8 426 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 SKAP1Q86WV1 359 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 HERVK_113Q902F9 699 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 TRIM43Q96BQ3 446 aaPredicted RBP6.65□□□□□ -1.34
CELF1-220ENST00000539455 FAM89AQ96GI7 184 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 DDX27Q96GQ7 796 aaKnown RBP6.65□□□□□ -1.34
CELF1-220ENST00000539455 WRNIP1Q96S55 665 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 LARP6Q9BRS8 491 aaKnown RBP6.65□□□□□ -1.34
CELF1-220ENST00000539455 TMEM39BQ9GZU3 492 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 SEC31BQ9NQW1 1179 aa6.65□□□□□ -1.34
CELF1-220ENST00000539455 GPHNQ9NQX3 736 aaPredicted RBP6.65□□□□□ -1.34
CELF1-220ENST00000539455 ZNF318Q5VUA4 2279 aa6.65□□□□□ -1.35
CELF1-220ENST00000539455 MGAMO43451 1857 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 MYH3P11055 1940 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 CHD7Q9P2D1 2997 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 SOWAHBA6NEL2 793 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 SRGAP3O43295 1099 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 HMMRO75330 724 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 ALADP13716 330 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 GTF2IP78347 998 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 FOXO4P98177 505 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 MTX1Q13505 466 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 TNFAIP1Q13829 316 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 ACAP1Q15027 740 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 CCDC129Q6ZRS4 1044 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 GJD3Q8N144 294 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 CERS5Q8N5B7 392 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 TMC2Q8TDI7 906 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 COA1Q9GZY4 146 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 IGSF5Q9NSI5 407 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 GJD2Q9UKL4 321 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 COG5Q9UP83 839 aa6.64□□□□□ -1.35
CELF1-220ENST00000539455 FASNP49327 2511 aaKnown RBP6.64□□□□□ -1.35
CELF1-220ENST00000539455 F8W031 263 aaPredicted RBP6.63□□□□□ -1.35
CELF1-220ENST00000539455 IRS4O14654 1257 aaPredicted RBP6.63□□□□□ -1.35
CELF1-220ENST00000539455 CCND3P30281 292 aaPredicted RBP6.63□□□□□ -1.35
CELF1-220ENST00000539455 CACNB2Q08289 660 aaPredicted RBP6.63□□□□□ -1.35
CELF1-220ENST00000539455 TCF15Q12870 199 aa6.63□□□□□ -1.35
CELF1-220ENST00000539455 RABL6Q3YEC7 729 aaPredicted RBP6.63□□□□□ -1.35
CELF1-220ENST00000539455 TRIM60Q495X7 471 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms