RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 ARNTP27540 789 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 FCGRTP55899 365 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 GRM2Q14416 872 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 SSPNQ14714 243 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 ZDHHC14Q8IZN3 488 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 FEZF2Q8TBJ5 459 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 MIPEPQ99797 713 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 ADAMTS10Q9H324 1103 aa4.15□□□□□ -1.75
CBX3P4-201ENST00000538909 SEMA7AO75326 666 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 NEFLP07196 543 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 FKBP4Q02790 459 aaKnown RBP eCLIP4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 ZBTB37Q5TC79 503 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 ERICH6BQ5W0A0 696 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 THAP5Q7Z6K1 395 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 PANK1Q8TE04 598 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 CCDC74AQ96AQ1 378 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 TRAK1Q9UPV9 953 aa4.14□□□□□ -1.75
CBX3P4-201ENST00000538909 WASH4PA8MWX3 477 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 LRIG2O94898 1065 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 INSRRP14616 1297 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 PI3P19957 117 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 SF3B2Q13435 895 aaKnown RBP4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 ZXDCQ2QGD7 858 aaPredicted RBP4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 CREG2Q8IUH2 290 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 TMEM151BQ8IW70 566 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 PBXIP1Q96AQ6 731 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 SLC6A17Q9H1V8 727 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 GCM1Q9NP62 436 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 BRPF3Q9ULD4 1205 aa4.13□□□□□ -1.75
CBX3P4-201ENST00000538909 FANCGO15287 622 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 ESR1P03372 595 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 NME2P22392 152 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 PDE6BP35913 854 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 PUM1Q14671 1186 aaKnown RBP eCLIP4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 VMACQ2NL98 169 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 TIGD5Q53EQ6 642 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 C22orf34Q6ZV56 151 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 IRF2BP1Q8IU81 584 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 RIN3Q8TB24 985 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 GRIN3AQ8TCU5 1115 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 EMILIN2Q9BXX0 1053 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 ADAM7Q9H2U9 754 aa4.12□□□□□ -1.75
CBX3P4-201ENST00000538909 TEX51A0A1B0GUA7 166 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 PEX10O60683 326 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 SSFA2P28290 1259 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 RING1Q06587 406 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 TNK2Q07912 1038 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 ZNF252P-AS1Q0IIN9 211 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 SYT8Q8NBV8 401 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 KCT2Q8NC54 265 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 EPS8L3Q8TE67 593 aaKnown RBP4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 INTS4Q96HW7 963 aaKnown RBP4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 FBRSQ9HAH7 460 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 AKAP2Q9Y2D5 859 aa4.11□□□□□ -1.75
CBX3P4-201ENST00000538909 PRAMEF27A3QJZ7 478 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 EIF1AYO14602 144 aaKnown RBP4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 SUV39H1O43463 412 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 GALK1P51570 392 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 AFF3P51826 1226 aaKnown RBP4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 TMPRSS7Q7RTY8 843 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 ZNF507Q8TCN5 953 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 XAGE3Q8WTP9 111 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 ELMO3Q96BJ8 720 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 SP110Q9HB58 689 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 PCDHA4Q9UN74 947 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 MTMR7Q9Y216 660 aa4.1□□□□□ -1.75
CBX3P4-201ENST00000538909 NKG7Q16617 165 aa4.09□□□□□ -1.75
CBX3P4-201ENST00000538909 SPATS1Q496A3 300 aa4.09□□□□□ -1.75
CBX3P4-201ENST00000538909 LETMD1Q6P1Q0 360 aa4.09□□□□□ -1.75
CBX3P4-201ENST00000538909 PI16Q6UXB8 463 aa4.09□□□□□ -1.75
CBX3P4-201ENST00000538909 BDH2Q9BUT1 245 aa4.09□□□□□ -1.75
CBX3P4-201ENST00000538909 ZNF552Q9H707 407 aaPredicted RBP4.09□□□□□ -1.75
CBX3P4-201ENST00000538909 IRAK3Q9Y616 596 aa4.09□□□□□ -1.75
CBX3P4-201ENST00000538909 PLP2Q04941 152 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 SLBPQ14493 270 aaKnown RBP eCLIP4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 LILRA2Q8N149 483 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 OXR1Q8N573 874 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 PDZD8Q8NEN9 1154 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 SIGLEC10Q96LC7 697 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 NIF3L1Q9GZT8 377 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 CACNA2D2Q9NY47 1150 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 GPR160Q9UJ42 338 aa4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 YBX2Q9Y2T7 364 aaKnown RBP4.08□□□□□ -1.76
CBX3P4-201ENST00000538909 SLC22A31A6NKX4 558 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 ZGLP1P0C6A0 271 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 TPP2P29144 1249 aaPredicted RBP4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 EPHB3P54753 998 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 EGR3Q06889 387 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 EFEMP1Q12805 493 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 INPP5AQ14642 412 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 ZNF746Q6NUN9 644 aaPredicted RBP4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 CDH24Q86UP0 819 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 MFSD2AQ8NA29 543 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 TMC1Q8TDI8 760 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 DACT3Q96B18 629 aaPredicted RBP4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 GPR20Q99678 358 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 CWC22Q9HCG8 908 aaKnown RBP4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 PPP4R2Q9NY27 417 aa4.07□□□□□ -1.76
CBX3P4-201ENST00000538909 ADAMTS20P59510 1910 aa4.06□□□□□ -1.76
CBX3P4-201ENST00000538909 FITM1A5D6W6 292 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms