RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CCDC85CA6NKD9 419 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 MX1P20591 662 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 SLC4A8Q2Y0W8 1093 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 ANKRD45Q5TZF3 282 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 SMC5Q8IY18 1101 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 EFCC1Q9HA90 598 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 MCM9Q9NXL9 1143 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 ZBTB21Q9ULJ3 1066 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 TRIM17Q9Y577 477 aa20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 SUPT16HQ9Y5B9 1047 aaKnown RBP20.74■□□□□ 0.91
SFSWAP-205ENST00000537164 POLR3DP05423 398 aaPredicted RBP20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 ZFYP08048 801 aaPredicted RBP20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 SHMT1P34896 483 aa20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 LACTBP83111 547 aaPredicted RBP20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 ARHGEF6Q15052 776 aa20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 GADL1Q6ZQY3 521 aa20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 EXOC6Q8TAG9 804 aa20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 STAP2Q9UGK3 403 aa20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 ZSWIM8A7E2V4 1837 aa20.73■□□□□ 0.91
SFSWAP-205ENST00000537164 MYH8P13535 1937 aa20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 PRKAB2O43741 272 aa20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 GDF11O95390 407 aa20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 BCRP11274 1271 aa20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 BACE1P56817 501 aa20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 SHROOM1Q2M3G4 852 aaPredicted RBP20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 PTPN22Q9Y2R2 807 aa20.72■□□□□ 0.91
SFSWAP-205ENST00000537164 MGAMO43451 1857 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 C19orf81C9J6K1 198 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 RNF113AO15541 343 aaKnown RBP20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 GNRH1P01148 92 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 CYP2C8P10632 490 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 RGS19P49795 217 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 HMGCS2P54868 508 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 CERKLQ49MI3 558 aaPredicted RBP20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 TREML2Q5T2D2 321 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 APPBP2Q92624 585 aa20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 ZBTB47Q9UFB7 747 aaPredicted RBP20.71■□□□□ 0.91
SFSWAP-205ENST00000537164 GH2P01242 217 aa20.7■□□□□ 0.9
SFSWAP-205ENST00000537164 LRRFIP1Q32MZ4 808 aaKnown RBP20.7■□□□□ 0.9
SFSWAP-205ENST00000537164 OSBP2Q969R2 916 aa20.7■□□□□ 0.9
SFSWAP-205ENST00000537164 STRBPQ96SI9 672 aaKnown RBP20.7■□□□□ 0.9
SFSWAP-205ENST00000537164 CPA4Q9UI42 421 aa20.7■□□□□ 0.9
SFSWAP-205ENST00000537164 TNRC18O15417 2968 aaPredicted RBP20.7■□□□□ 0.9
SFSWAP-205ENST00000537164 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 EVX2Q03828 476 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 MTMR2Q13614 643 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 KIF22Q14807 665 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 C12orf60Q5U649 245 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 SWAP70Q9UH65 585 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 PNMA3Q9UL41 463 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 SLC4A4Q9Y6R1 1079 aa20.69■□□□□ 0.9
SFSWAP-205ENST00000537164 IGHDP01880 384 aa20.68■□□□□ 0.9
SFSWAP-205ENST00000537164 HOXA7P31268 230 aaPredicted RBP20.68■□□□□ 0.9
SFSWAP-205ENST00000537164 PDE1AP54750 535 aa20.68■□□□□ 0.9
SFSWAP-205ENST00000537164 PABPC4Q13310 644 aaKnown RBP eCLIP20.68■□□□□ 0.9
SFSWAP-205ENST00000537164 ABCB5Q2M3G0 1257 aa20.68■□□□□ 0.9
SFSWAP-205ENST00000537164 GIMAP6Q6P9H5 292 aa20.68■□□□□ 0.9
SFSWAP-205ENST00000537164 ARHGAP39Q9C0H5 1083 aa20.68■□□□□ 0.9
SFSWAP-205ENST00000537164 USP17L12C9JPN9 530 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 USP17L21D6R901 530 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 CYP2D6P10635 497 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 CTGFP29279 349 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 PRMT2P55345 433 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 DDRGK1Q96HY6 314 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 BRCA2P51587 3418 aa20.67■□□□□ 0.9
SFSWAP-205ENST00000537164 GSG1L2A8MUP6 293 aa20.66■□□□□ 0.9
SFSWAP-205ENST00000537164 GUCY1A2P33402 732 aa20.66■□□□□ 0.9
SFSWAP-205ENST00000537164 SBK1Q52WX2 424 aa20.66■□□□□ 0.9
SFSWAP-205ENST00000537164 CTR9Q6PD62 1173 aa20.66■□□□□ 0.9
SFSWAP-205ENST00000537164 C12orf42Q96LP6 360 aa20.66■□□□□ 0.9
SFSWAP-205ENST00000537164 CABP5Q9NP86 173 aa20.66■□□□□ 0.9
SFSWAP-205ENST00000537164 RBBP6Q7Z6E9 1792 aaKnown RBP20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 GPAA1O43292 621 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 GNAT2P19087 354 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 C16orf86Q6ZW13 317 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 AMOTL1Q8IY63 956 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 SMCR8Q8TEV9 937 aaPredicted RBP20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 ARMC5Q96C12 935 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 TRIM47Q96LD4 638 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 KIAA1683Q9H0B3 1180 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 ASCC2Q9H1I8 757 aaPredicted RBP20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 EMILIN3Q9NT22 766 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 TMOD4Q9NZQ9 345 aa20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 ARPP21Q9UBL0 812 aaPredicted RBP20.65■□□□□ 0.9
SFSWAP-205ENST00000537164 OSBPP22059 807 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 PSMC4P43686 418 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 GCLCP48506 637 aaPredicted RBP20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 NUCB1Q02818 461 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 FAM110CQ1W6H9 321 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 ZMYM1Q5SVZ6 1142 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 USP17L2Q6R6M4 530 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 SLC44A5Q8NCS7 719 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 EVI5LQ96CN4 794 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 DYNLL2Q96FJ2 89 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 FSD1Q9BTV5 496 aa20.64■□□□□ 0.89
SFSWAP-205ENST00000537164 CYP2D7A0A087X1C5 515 aa20.63■□□□□ 0.89
SFSWAP-205ENST00000537164 M0R2C6 588 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms