RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 CHD7Q9P2D1 2997 aa6.54□□□□□ -1.36
CHD4-205ENST00000536301 MROH7-TTC4A0A0A0MT08 1334 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 BDP1A6H8Y1 2624 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 USP17L5A8MUK1 530 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 TBC1D12O60347 775 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 CYP2C19P33261 490 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 RGS2P41220 211 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 IRX3P78415 501 aaPredicted RBP6.53□□□□□ -1.36
CHD4-205ENST00000536301 SMAD3P84022 425 aaKnown RBP6.53□□□□□ -1.36
CHD4-205ENST00000536301 RASGRF1Q13972 1273 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 ATP2B3Q16720 1220 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 PLEKHH3Q7Z736 793 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 GPRC5AQ8NFJ5 357 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 PPM1EQ8WY54 764 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 NECAB3Q96P71 396 aaPredicted RBP6.53□□□□□ -1.36
CHD4-205ENST00000536301 APBA2Q99767 749 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 USP44Q9H0E7 712 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 OSBPL5Q9H0X9 879 aaPredicted RBP6.53□□□□□ -1.36
CHD4-205ENST00000536301 ABCF2Q9UG63 623 aa6.53□□□□□ -1.36
CHD4-205ENST00000536301 DDX20Q9UHI6 824 aaKnown RBP6.53□□□□□ -1.36
CHD4-205ENST00000536301 PA2G4Q9UQ80 394 aaKnown RBP6.53□□□□□ -1.36
CHD4-205ENST00000536301 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.53□□□□□ -1.36
CHD4-205ENST00000536301 MUC6Q6W4X9 2439 aa6.52□□□□□ -1.36
CHD4-205ENST00000536301 ZNFX1Q9P2E3 1918 aaKnown RBP6.52□□□□□ -1.37
CHD4-205ENST00000536301 CHD9Q3L8U1 2897 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 GBF1Q92538 1859 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 GPR75-ASB3A0A0A6YYF3 556 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 GDF11O95390 407 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 IGHA2P01877 340 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 CNGA1P29973 690 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 HOXA7P31268 230 aaPredicted RBP6.52□□□□□ -1.37
CHD4-205ENST00000536301 BACE1P56817 501 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 MECOMQ03112 1051 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 MAP2K5Q13163 448 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 PABPC4Q13310 644 aaKnown RBP eCLIP6.52□□□□□ -1.37
CHD4-205ENST00000536301 PDE3AQ14432 1141 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 CCDC102BQ68D86 513 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 PI16Q6UXB8 463 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 SLC39A5Q6ZMH5 540 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 DZIP1Q86YF9 867 aaKnown RBP6.52□□□□□ -1.37
CHD4-205ENST00000536301 LPAR1Q92633 364 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 SYMPKQ92797 1274 aaKnown RBP6.52□□□□□ -1.37
CHD4-205ENST00000536301 FERMT2Q96AC1 680 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 FAM163AQ96GL9 167 aaPredicted RBP6.52□□□□□ -1.37
CHD4-205ENST00000536301 EMILIN3Q9NT22 766 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 DENND2AQ9ULE3 1009 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 PIEZO1Q92508 2521 aa6.52□□□□□ -1.37
CHD4-205ENST00000536301 BRWD1Q9NSI6 2320 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 FOCADQ5VW36 1801 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 GRXCR1A8MXD5 290 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 DNM1LO00429 736 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 CYBAP13498 195 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 MAPK4P31152 587 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 HOXD11P31277 338 aaPredicted RBP6.51□□□□□ -1.37
CHD4-205ENST00000536301 PBX2P40425 430 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 TIMM10P62072 90 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 MAP3K12Q12852 859 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 ADGRE1Q14246 886 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 SNX17Q15036 470 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 PRAMEF19Q5SWL8 479 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 MRPL50Q8N5N7 158 aaKnown RBP6.51□□□□□ -1.37
CHD4-205ENST00000536301 SH3RF3Q8TEJ3 882 aaPredicted RBP6.51□□□□□ -1.37
CHD4-205ENST00000536301 FAM122AQ96E09 287 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 EDC3Q96F86 508 aaKnown RBP6.51□□□□□ -1.37
CHD4-205ENST00000536301 RNPC3Q96LT9 517 aaKnown RBP6.51□□□□□ -1.37
CHD4-205ENST00000536301 WDR18Q9BV38 432 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 BTBD7Q9P203 1132 aa6.51□□□□□ -1.37
CHD4-205ENST00000536301 PRRC2BQ5JSZ5 2229 aaKnown RBP6.51□□□□□ -1.37
CHD4-205ENST00000536301 MYCNP04198 464 aaPredicted RBP6.5□□□□□ -1.37
CHD4-205ENST00000536301 PTPREP23469 700 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 DNAJB2P25686 324 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 ADCYAP1R1P41586 468 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 TLE2Q04725 743 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 ZYXQ15942 572 aaKnown RBP6.5□□□□□ -1.37
CHD4-205ENST00000536301 NCBP3Q53F19 620 aaKnown RBP6.5□□□□□ -1.37
CHD4-205ENST00000536301 WDR78Q5VTH9 848 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 MFSD14CQ5VZR4 134 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 TEX11Q8IYF3 940 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 TRMT44Q8IYL2 757 aaKnown RBP6.5□□□□□ -1.37
CHD4-205ENST00000536301 ADAMTS19Q8TE59 1207 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 NSUN4Q96CB9 384 aaKnown RBP6.5□□□□□ -1.37
CHD4-205ENST00000536301 TMOD4Q9NZQ9 345 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 CEP126Q9P2H0 1117 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 PRKAG2Q9UGJ0 569 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 ZBTB21Q9ULJ3 1066 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
CHD4-205ENST00000536301 MYH1P12882 1939 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 USP17L10C9JJH3 530 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 SEMA3EO15041 775 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 COBLO75128 1261 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 NPM3O75607 178 aaKnown RBP6.49□□□□□ -1.37
CHD4-205ENST00000536301 HOXC6P09630 235 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 ATP2B2Q01814 1243 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 GRB14Q14449 540 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 LRRC41Q15345 812 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 CCDC85BQ15834 202 aaPredicted RBP6.49□□□□□ -1.37
CHD4-205ENST00000536301 FAM47AQ5JRC9 791 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 ERICH6Q7L0X2 663 aa6.49□□□□□ -1.37
CHD4-205ENST00000536301 ADGRA1Q86SQ6 560 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms