RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 SLURP2P0DP57 97 aa9.96□□□□□ -0.82
NEDD8-207ENST00000533242 PICALMQ13492 652 aa9.96□□□□□ -0.82
NEDD8-207ENST00000533242 CCDC102BQ68D86 513 aa9.96□□□□□ -0.82
NEDD8-207ENST00000533242 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-207ENST00000533242 DEFB123Q8N688 67 aa9.96□□□□□ -0.82
NEDD8-207ENST00000533242 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.96□□□□□ -0.82
NEDD8-207ENST00000533242 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.96□□□□□ -0.82
NEDD8-207ENST00000533242 OGDHLQ9ULD0 1010 aa9.96□□□□□ -0.82
NEDD8-207ENST00000533242 CENPFP49454 3210 aa9.96□□□□□ -0.82
NEDD8-207ENST00000533242 SIPA1L1O43166 1804 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 GPR75-ASB3A0A0A6YYF3 556 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 CD2BP2O95400 341 aaKnown RBP9.95□□□□□ -0.82
NEDD8-207ENST00000533242 ADORA1P30542 326 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 MAGEA10P43363 369 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-207ENST00000533242 RHBDL3P58872 404 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 SPP2Q13103 211 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 SH3D19Q5HYK7 790 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 TBC1D9Q6ZT07 1266 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 ZNF280CQ8ND82 737 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 MORF4L1Q9UBU8 362 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 FOCADQ5VW36 1801 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 CDK5RAP2Q96SN8 1893 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 UBTFL1P0CB47 393 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-207ENST00000533242 RBM25P49756 843 aaKnown RBP9.95□□□□□ -0.82
NEDD8-207ENST00000533242 TRIM32Q13049 653 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 RASGRF1Q13972 1273 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 TDHQ8IZJ6 230 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 ASCC2Q9H1I8 757 aaPredicted RBP9.95□□□□□ -0.82
NEDD8-207ENST00000533242 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 BRPF3Q9ULD4 1205 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 HDAC5Q9UQL6 1122 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 MAST2Q6P0Q8 1798 aa9.95□□□□□ -0.82
NEDD8-207ENST00000533242 MAP3K21Q5TCX8 1036 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 PLEKHM2Q8IWE5 1019 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 TRMT44Q8IYL2 757 aaKnown RBP9.94□□□□□ -0.82
NEDD8-207ENST00000533242 AS3MTQ9HBK9 375 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 COPRSQ9NQ92 184 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 MTMR10Q9NXD2 777 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 USP17L5A8MUK1 530 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 SMARCA5O60264 1052 aaPredicted RBP9.94□□□□□ -0.82
NEDD8-207ENST00000533242 LDHCP07864 332 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 SYN1P17600 705 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 CAP2P40123 477 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 HMGCS2P54868 508 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 GSTO1P78417 241 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 MECOMQ03112 1051 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 CEP85Q6P2H3 762 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 Q7L0L9 218 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 TRIB2Q92519 343 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 UBE2OQ9C0C9 1292 aaKnown RBP9.94□□□□□ -0.82
NEDD8-207ENST00000533242 DCTPP1Q9H773 170 aa9.94□□□□□ -0.82
NEDD8-207ENST00000533242 APBB1O00213 710 aa9.93□□□□□ -0.82
NEDD8-207ENST00000533242 WDR18Q9BV38 432 aa9.93□□□□□ -0.82
NEDD8-207ENST00000533242 FAM196BA6NMK8 535 aa9.93□□□□□ -0.82
NEDD8-207ENST00000533242 XRCC5P13010 732 aaKnown RBP9.93□□□□□ -0.82
NEDD8-207ENST00000533242 SOCS4Q8WXH5 440 aa9.93□□□□□ -0.82
NEDD8-207ENST00000533242 NUDT12Q9BQG2 462 aa9.93□□□□□ -0.82
NEDD8-207ENST00000533242 HERC5Q9UII4 1024 aaKnown RBP9.93□□□□□ -0.82
NEDD8-207ENST00000533242 PA2G4Q9UQ80 394 aaKnown RBP9.93□□□□□ -0.82
NEDD8-207ENST00000533242 AKAP2Q9Y2D5 859 aa9.93□□□□□ -0.82
NEDD8-207ENST00000533242 BRCA2P51587 3418 aa9.92□□□□□ -0.82
NEDD8-207ENST00000533242 PFASO15067 1338 aa9.92□□□□□ -0.82
NEDD8-207ENST00000533242 COL6A1P12109 1028 aa9.92□□□□□ -0.82
NEDD8-207ENST00000533242 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
NEDD8-207ENST00000533242 IRX3P78415 501 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-207ENST00000533242 ZNF384Q8TF68 577 aa9.92□□□□□ -0.82
NEDD8-207ENST00000533242 XAGE2Q96GT9 111 aa9.92□□□□□ -0.82
NEDD8-207ENST00000533242 CYP2B6P20813 491 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 HOXA7P31268 230 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 TIMM10P62072 90 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 RRP1BQ14684 758 aaKnown RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 GPRC5AQ8NFJ5 357 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 CHMP4BQ9H444 224 aaKnown RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 TMOD4Q9NZQ9 345 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 A0A1B0GUL7 405 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 ZKSCAN1P17029 563 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 MAPK4P31152 587 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 DDIT3P35638 169 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 FAM109BQ6ICB4 259 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 GTF3C2Q8WUA4 911 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 USP6NLQ92738 828 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 NSUN4Q96CB9 384 aaKnown RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
NEDD8-207ENST00000533242 GINM1Q9NU53 330 aa9.91□□□□□ -0.82
NEDD8-207ENST00000533242 C19orf81C9J6K1 198 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 BACE1P56817 501 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 TEX11Q8IYF3 940 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 P2RX7Q99572 595 aaKnown RBP9.9□□□□□ -0.82
NEDD8-207ENST00000533242 HMG20BQ9P0W2 317 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 LTBP2Q14767 1821 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 RGS2P41220 211 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 HERVK_113P62684 666 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 CACNB2Q08289 660 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-207ENST00000533242 TFCP2Q12800 502 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 MTMR2Q13614 643 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 SPATA5Q8NB90 893 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 DHX36Q9H2U1 1008 aaKnown RBP9.9□□□□□ -0.82
NEDD8-207ENST00000533242 PI4KBQ9UBF8 816 aa9.9□□□□□ -0.82
NEDD8-207ENST00000533242 ASNSP08243 561 aa9.89□□□□□ -0.83
NEDD8-207ENST00000533242 LRRC26Q2I0M4 334 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms