RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CCDC129Q6ZRS4 1044 aa16.74■□□□□ 0.27
TSPAN4-220ENST00000532375 DYNLL2Q96FJ2 89 aa16.74■□□□□ 0.27
TSPAN4-220ENST00000532375 PICK1Q9NRD5 415 aa16.74■□□□□ 0.27
TSPAN4-220ENST00000532375 A0A0G2JLL6 359 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 TRIM6-TRIM34B2RNG4 842 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 BTBD19C9JJ37 291 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 GDF11O95390 407 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 TBC1D8O95759 1140 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 CETPP11597 493 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 SDSP20132 328 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 NMIQ13287 307 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 TTC22Q5TAA0 569 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 GPAT2Q6NUI2 795 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 CENPQQ7L2Z9 268 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 IFNL3Q8IZI9 196 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 SLC44A5Q8NCS7 719 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 RILPL2Q969X0 211 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 WDR18Q9BV38 432 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 HELLSQ9NRZ9 838 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 GINM1Q9NU53 330 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 ZBTB21Q9ULJ3 1066 aa16.73■□□□□ 0.27
TSPAN4-220ENST00000532375 ALDH1A1P00352 501 aa16.72■□□□□ 0.27
TSPAN4-220ENST00000532375 ASNSP08243 561 aa16.72■□□□□ 0.27
TSPAN4-220ENST00000532375 GNAT2P19087 354 aa16.72■□□□□ 0.27
TSPAN4-220ENST00000532375 GUCY1A2P33402 732 aa16.72■□□□□ 0.27
TSPAN4-220ENST00000532375 NOM1Q5C9Z4 860 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-220ENST00000532375 SKAP1Q86WV1 359 aa16.72■□□□□ 0.27
TSPAN4-220ENST00000532375 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
TSPAN4-220ENST00000532375 MYH8P13535 1937 aa16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 SPP2Q13103 211 aa16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 CERKLQ49MI3 558 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 VPS53Q5VIR6 699 aa16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 ZNF589Q86UQ0 364 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 ZNF280CQ8ND82 737 aa16.71■□□□□ 0.27
TSPAN4-220ENST00000532375 GH2P01242 217 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 CDK8P49336 464 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 CRHR2Q13324 411 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 MCMDC2Q4G0Z9 681 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 SH3D19Q5HYK7 790 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 ANKRD23Q86SG2 305 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 TRIM34Q9BYJ4 488 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 TBC1D2Q9BYX2 928 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 ZCCHC17Q9NP64 241 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 ARPP21Q9UBL0 812 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
TSPAN4-220ENST00000532375 ROBO3Q96MS0 1386 aa16.69■□□□□ 0.26
TSPAN4-220ENST00000532375 TRIM75PA6NK02 468 aa16.69■□□□□ 0.26
TSPAN4-220ENST00000532375 GPR25O00155 361 aa16.69■□□□□ 0.26
TSPAN4-220ENST00000532375 ALX1Q15699 326 aa16.69■□□□□ 0.26
TSPAN4-220ENST00000532375 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
TSPAN4-220ENST00000532375 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
TSPAN4-220ENST00000532375 LOC285556D6RIA3 1793 aa16.69■□□□□ 0.26
TSPAN4-220ENST00000532375 AKR1B1P15121 316 aa16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 DGKZQ13574 1117 aa16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 ABCB5Q2M3G0 1257 aa16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 IL25Q9H293 177 aa16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 TACC3Q9Y6A5 838 aa16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 GREB1LQ9C091 1923 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 ADGRA2Q96PE1 1338 aa16.68■□□□□ 0.26
TSPAN4-220ENST00000532375 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 APPP05067 770 aa16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 HSPD1P10809 573 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 BACE1P56817 501 aa16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 CAP1Q01518 475 aa16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 SEPT2Q15019 361 aa16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 FASTKD5Q7L8L6 764 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 ZNF296Q8WUU4 475 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 DDRGK1Q96HY6 314 aa16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
TSPAN4-220ENST00000532375 PDHXO00330 501 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 FGAP02671 866 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 RASA1P20936 1047 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 TDO2P48775 406 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 TAF1CQ15572 869 aaPredicted RBP16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 TREML2Q5T2D2 321 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 CWC27Q6UX04 472 aaKnown RBP16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 ACER1Q8TDN7 264 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 AS3MTQ9HBK9 375 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 EMILIN3Q9NT22 766 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 CCDC171Q6TFL3 1326 aa16.66■□□□□ 0.26
TSPAN4-220ENST00000532375 A0A1W2PRG0 241 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 TLR2O60603 784 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 NEFLP07196 543 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 HMGCS2P54868 508 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 MTMR2Q13614 643 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 C17orf99Q6UX52 265 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 AMOTL1Q8IY63 956 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 PROCA1Q8NCQ7 364 aaPredicted RBP16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 CCDC17Q96LX7 622 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 NACAP1Q9BZK3 213 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 ZFYVE28Q9HCC9 887 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 SLC45A1Q9Y2W3 748 aa16.65■□□□□ 0.26
TSPAN4-220ENST00000532375 C19orf81C9J6K1 198 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms