RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 OTUD5Q96G74 571 aa26.49■■□□□ 1.83
LRRK1-208ENST00000532029 CABP5Q9NP86 173 aa26.49■■□□□ 1.83
LRRK1-208ENST00000532029 ANO2Q9NQ90 1003 aa26.49■■□□□ 1.83
LRRK1-208ENST00000532029 ANAPC4Q9UJX5 808 aa26.49■■□□□ 1.83
LRRK1-208ENST00000532029 U3KPZ7 1027 aaPredicted RBP26.49■■□□□ 1.83
LRRK1-208ENST00000532029 ZNF213O14771 459 aa26.48■■□□□ 1.83
LRRK1-208ENST00000532029 ASNSP08243 561 aa26.48■■□□□ 1.83
LRRK1-208ENST00000532029 HAND2P61296 217 aa26.48■■□□□ 1.83
LRRK1-208ENST00000532029 CTDSPL2Q05D32 466 aa26.48■■□□□ 1.83
LRRK1-208ENST00000532029 ABCB5Q2M3G0 1257 aa26.48■■□□□ 1.83
LRRK1-208ENST00000532029 SPRYD7Q5W111 196 aa26.48■■□□□ 1.83
LRRK1-208ENST00000532029 DOCK1Q14185 1865 aa26.48■■□□□ 1.83
LRRK1-208ENST00000532029 FAM155AB1AL88 458 aaPredicted RBP26.47■■□□□ 1.83
LRRK1-208ENST00000532029 MPHOSPH10O00566 681 aaKnown RBP26.47■■□□□ 1.83
LRRK1-208ENST00000532029 ZBTB48P10074 688 aaPredicted RBP26.47■■□□□ 1.83
LRRK1-208ENST00000532029 PPATQ06203 517 aa26.47■■□□□ 1.83
LRRK1-208ENST00000532029 MKRN3Q13064 507 aaKnown RBP26.47■■□□□ 1.83
LRRK1-208ENST00000532029 NOGQ13253 232 aa26.47■■□□□ 1.83
LRRK1-208ENST00000532029 IMMTQ16891 758 aaKnown RBP26.47■■□□□ 1.83
LRRK1-208ENST00000532029 CNKSR2Q8WXI2 1034 aa26.47■■□□□ 1.83
LRRK1-208ENST00000532029 CCDC17Q96LX7 622 aa26.47■■□□□ 1.83
LRRK1-208ENST00000532029 ZBTB21Q9ULJ3 1066 aa26.47■■□□□ 1.83
LRRK1-208ENST00000532029 GH2P01242 217 aa26.46■■□□□ 1.83
LRRK1-208ENST00000532029 PTPRAP18433 802 aa26.46■■□□□ 1.83
LRRK1-208ENST00000532029 PPIL2Q13356 520 aa26.46■■□□□ 1.83
LRRK1-208ENST00000532029 LSG1Q9H089 658 aaKnown RBP26.46■■□□□ 1.83
LRRK1-208ENST00000532029 USP17L5A8MUK1 530 aa26.45■■□□□ 1.82
LRRK1-208ENST00000532029 PRDM1O75626 825 aa26.45■■□□□ 1.82
LRRK1-208ENST00000532029 ZNF444Q8N0Y2 327 aaPredicted RBP26.45■■□□□ 1.82
LRRK1-208ENST00000532029 JMYQ8N9B5 988 aa26.45■■□□□ 1.82
LRRK1-208ENST00000532029 MAP4K1Q92918 833 aa26.45■■□□□ 1.82
LRRK1-208ENST00000532029 ZHX2Q9Y6X8 837 aa26.45■■□□□ 1.82
LRRK1-208ENST00000532029 AOC2O75106 756 aa26.44■■□□□ 1.82
LRRK1-208ENST00000532029 GJA5P36382 358 aa26.44■■□□□ 1.82
LRRK1-208ENST00000532029 JAG1P78504 1218 aa26.44■■□□□ 1.82
LRRK1-208ENST00000532029 TBC1D2Q9BYX2 928 aa26.44■■□□□ 1.82
LRRK1-208ENST00000532029 RNF41Q9H4P4 317 aaPredicted RBP26.44■■□□□ 1.82
LRRK1-208ENST00000532029 AS3MTQ9HBK9 375 aa26.44■■□□□ 1.82
LRRK1-208ENST00000532029 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.44■■□□□ 1.82
LRRK1-208ENST00000532029 AKR1B1P15121 316 aa26.43■■□□□ 1.82
LRRK1-208ENST00000532029 RASA1P20936 1047 aa26.43■■□□□ 1.82
LRRK1-208ENST00000532029 RAB3GAP1Q15042 981 aa26.43■■□□□ 1.82
LRRK1-208ENST00000532029 SHROOM1Q2M3G4 852 aaPredicted RBP26.43■■□□□ 1.82
LRRK1-208ENST00000532029 TMEM179Q6ZVK1 233 aa26.43■■□□□ 1.82
LRRK1-208ENST00000532029 CCDC84Q86UT8 332 aaPredicted RBP26.43■■□□□ 1.82
LRRK1-208ENST00000532029 TOMM22Q9NS69 142 aa26.43■■□□□ 1.82
LRRK1-208ENST00000532029 RBM8AQ9Y5S9 174 aaKnown RBP26.43■■□□□ 1.82
LRRK1-208ENST00000532029 ATAD5Q96QE3 1844 aa26.43■■□□□ 1.82
LRRK1-208ENST00000532029 MYH8P13535 1937 aa26.43■■□□□ 1.82
LRRK1-208ENST00000532029 MAP2K2P36507 400 aa26.42■■□□□ 1.82
LRRK1-208ENST00000532029 KIF23Q02241 960 aaPredicted RBP26.42■■□□□ 1.82
LRRK1-208ENST00000532029 AKNAD1Q5T1N1 836 aa26.42■■□□□ 1.82
LRRK1-208ENST00000532029 MFSD6Q6ZSS7 791 aa26.42■■□□□ 1.82
LRRK1-208ENST00000532029 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.42■■□□□ 1.82
LRRK1-208ENST00000532029 REC8O95072 547 aa26.41■■□□□ 1.82
LRRK1-208ENST00000532029 PCP11498 1178 aaKnown RBP26.41■■□□□ 1.82
LRRK1-208ENST00000532029 TBC1D10CQ8IV04 446 aa26.41■■□□□ 1.82
LRRK1-208ENST00000532029 STAG1Q8WVM7 1258 aa26.41■■□□□ 1.82
LRRK1-208ENST00000532029 LAMA4Q16363 1823 aa26.4■■□□□ 1.82
LRRK1-208ENST00000532029 MANSC4A6NHS7 340 aaPredicted RBP26.4■■□□□ 1.82
LRRK1-208ENST00000532029 IRF6O14896 467 aa26.4■■□□□ 1.82
LRRK1-208ENST00000532029 GTF2A2P52657 109 aa26.4■■□□□ 1.82
LRRK1-208ENST00000532029 SNAPC2Q13487 334 aa26.4■■□□□ 1.82
LRRK1-208ENST00000532029 SEPT2Q15019 361 aa26.4■■□□□ 1.82
LRRK1-208ENST00000532029 RRP12Q5JTH9 1297 aaKnown RBP26.4■■□□□ 1.82
LRRK1-208ENST00000532029 NBPF3Q9H094 633 aa26.4■■□□□ 1.82
LRRK1-208ENST00000532029 INCENPQ9NQS7 918 aa26.4■■□□□ 1.82
LRRK1-208ENST00000532029 CXCL11O14625 94 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 ORC4O43929 436 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 FGRP09769 529 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 TSPY3P0CV98 308 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 TSPY8P0CW00 308 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 REM2Q8IYK8 340 aaPredicted RBP26.39■■□□□ 1.82
LRRK1-208ENST00000532029 ZNF280CQ8ND82 737 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 ZIC5Q96T25 663 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 WDR18Q9BV38 432 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 KCNH4Q9UQ05 1017 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 AFG3L2Q9Y4W6 797 aa26.39■■□□□ 1.82
LRRK1-208ENST00000532029 TRIM75PA6NK02 468 aa26.38■■□□□ 1.81
LRRK1-208ENST00000532029 RANBP6O60518 1105 aaKnown RBP26.38■■□□□ 1.81
LRRK1-208ENST00000532029 CYP21A2P08686 494 aa26.38■■□□□ 1.81
LRRK1-208ENST00000532029 GUCY1A2P33402 732 aa26.38■■□□□ 1.81
LRRK1-208ENST00000532029 TFAP4Q01664 338 aa26.38■■□□□ 1.81
LRRK1-208ENST00000532029 SREBF2Q12772 1141 aa26.38■■□□□ 1.81
LRRK1-208ENST00000532029 SPP2Q13103 211 aa26.38■■□□□ 1.81
LRRK1-208ENST00000532029 TACC3Q9Y6A5 838 aa26.38■■□□□ 1.81
LRRK1-208ENST00000532029 TSPY2A6NKD2 308 aa26.37■■□□□ 1.81
LRRK1-208ENST00000532029 CETPP11597 493 aa26.37■■□□□ 1.81
LRRK1-208ENST00000532029 INHBEP58166 350 aa26.37■■□□□ 1.81
LRRK1-208ENST00000532029 FAM47AQ5JRC9 791 aa26.37■■□□□ 1.81
LRRK1-208ENST00000532029 THSD7BQ9C0I4 1608 aa26.36■■□□□ 1.81
LRRK1-208ENST00000532029 CCL15-CCL14A0A0B4J2E2 113 aa26.36■■□□□ 1.81
LRRK1-208ENST00000532029 EIF5BO60841 1220 aaKnown RBP26.36■■□□□ 1.81
LRRK1-208ENST00000532029 ICA1Q05084 483 aa26.36■■□□□ 1.81
LRRK1-208ENST00000532029 CCL15Q16663 113 aa26.36■■□□□ 1.81
LRRK1-208ENST00000532029 NEDD1Q8NHV4 660 aa26.36■■□□□ 1.81
LRRK1-208ENST00000532029 KANSL2Q9H9L4 492 aa26.36■■□□□ 1.81
LRRK1-208ENST00000532029 NT5C2P49902 561 aa26.35■■□□□ 1.81
LRRK1-208ENST00000532029 RNF20Q5VTR2 975 aa26.35■■□□□ 1.81
LRRK1-208ENST00000532029 ESR2Q92731 530 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms