RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 CDC42BPGQ6DT37 1551 aa10.48□□□□□ -0.73
CHKA-205ENST00000530730 PDE4CQ08493 712 aa10.48□□□□□ -0.73
CHKA-205ENST00000530730 INTS5Q6P9B9 1019 aaKnown RBP10.48□□□□□ -0.73
CHKA-205ENST00000530730 BEND4Q6ZU67 534 aa10.48□□□□□ -0.73
CHKA-205ENST00000530730 FAM129BQ96TA1 746 aa10.48□□□□□ -0.73
CHKA-205ENST00000530730 NRSN2Q9GZP1 204 aa10.48□□□□□ -0.73
CHKA-205ENST00000530730 CYP4F12Q9HCS2 524 aa10.48□□□□□ -0.73
CHKA-205ENST00000530730 A0A1W2PP55 124 aa10.47□□□□□ -0.73
CHKA-205ENST00000530730 NDUFB5O43674 189 aa10.47□□□□□ -0.73
CHKA-205ENST00000530730 TGFB1P01137 390 aa10.47□□□□□ -0.73
CHKA-205ENST00000530730 KIAA0319Q5VV43 1072 aa10.47□□□□□ -0.73
CHKA-205ENST00000530730 NUTM2GQ5VZR2 741 aa10.47□□□□□ -0.73
CHKA-205ENST00000530730 UNC5CLQ8IV45 518 aa10.47□□□□□ -0.73
CHKA-205ENST00000530730 TCF12Q99081 682 aa10.47□□□□□ -0.73
CHKA-205ENST00000530730 CLEC4MQ9H2X3 399 aaPredicted RBP10.47□□□□□ -0.73
CHKA-205ENST00000530730 COL22A1Q8NFW1 1626 aaPredicted RBP10.47□□□□□ -0.73
CHKA-205ENST00000530730 A0A096LPE4 126 aa10.46□□□□□ -0.73
CHKA-205ENST00000530730 A0A1W2PPZ6 126 aa10.46□□□□□ -0.73
CHKA-205ENST00000530730 SAFB2Q14151 953 aaKnown RBP eCLIP10.46□□□□□ -0.73
CHKA-205ENST00000530730 EXOSC6Q5RKV6 272 aaKnown RBP10.46□□□□□ -0.73
CHKA-205ENST00000530730 PRAM1Q96QH2 718 aa10.46□□□□□ -0.73
CHKA-205ENST00000530730 DHX57Q6P158 1386 aaKnown RBP10.46□□□□□ -0.74
CHKA-205ENST00000530730 PRR19A6NJB7 356 aa10.45□□□□□ -0.74
CHKA-205ENST00000530730 GAS2O43903 313 aaKnown RBP10.45□□□□□ -0.74
CHKA-205ENST00000530730 POLR3DP05423 398 aaPredicted RBP10.45□□□□□ -0.74
CHKA-205ENST00000530730 SSTR4P31391 388 aa10.45□□□□□ -0.74
CHKA-205ENST00000530730 GRIK1P39086 918 aa10.45□□□□□ -0.74
CHKA-205ENST00000530730 USP26Q9BXU7 913 aa10.45□□□□□ -0.74
CHKA-205ENST00000530730 LIN7BQ9HAP6 207 aa10.45□□□□□ -0.74
CHKA-205ENST00000530730 METTL12A8MUP2 240 aa10.44□□□□□ -0.74
CHKA-205ENST00000530730 KCNF1Q9H3M0 494 aa10.44□□□□□ -0.74
CHKA-205ENST00000530730 POGKQ9P215 609 aa10.44□□□□□ -0.74
CHKA-205ENST00000530730 EP400Q96L91 3159 aa10.44□□□□□ -0.74
CHKA-205ENST00000530730 NRXN1Q9ULB1 1477 aa10.43□□□□□ -0.74
CHKA-205ENST00000530730 MED26O95402 600 aa10.43□□□□□ -0.74
CHKA-205ENST00000530730 DLGAP3O95886 979 aa10.43□□□□□ -0.74
CHKA-205ENST00000530730 MAP4P27816 1152 aaKnown RBP10.43□□□□□ -0.74
CHKA-205ENST00000530730 GRIA4P48058 902 aa10.43□□□□□ -0.74
CHKA-205ENST00000530730 PCDH1Q08174 1060 aa10.43□□□□□ -0.74
CHKA-205ENST00000530730 C12orf50Q8NA57 414 aaPredicted RBP10.43□□□□□ -0.74
CHKA-205ENST00000530730 PMFBP1Q8TBY8 1022 aa10.43□□□□□ -0.74
CHKA-205ENST00000530730 SLIT2O94813 1529 aa10.43□□□□□ -0.74
CHKA-205ENST00000530730 FAM83GA6ND36 823 aa10.42□□□□□ -0.74
CHKA-205ENST00000530730 CPNE3O75131 537 aaKnown RBP10.42□□□□□ -0.74
CHKA-205ENST00000530730 IGHA2P01877 340 aa10.42□□□□□ -0.74
CHKA-205ENST00000530730 SPINK2P20155 84 aa10.42□□□□□ -0.74
CHKA-205ENST00000530730 GSTM4Q03013 218 aa10.42□□□□□ -0.74
CHKA-205ENST00000530730 PTPN12Q05209 780 aaKnown RBP10.42□□□□□ -0.74
CHKA-205ENST00000530730 CPSF6Q16630 551 aaKnown RBP eCLIP10.42□□□□□ -0.74
CHKA-205ENST00000530730 HP1BP3Q5SSJ5 553 aaPredicted RBP10.42□□□□□ -0.74
CHKA-205ENST00000530730 DNAJC25Q9H1X3 360 aa10.42□□□□□ -0.74
CHKA-205ENST00000530730 ZFYVE1Q9HBF4 777 aa10.42□□□□□ -0.74
CHKA-205ENST00000530730 RALGAPBQ86X10 1494 aa10.42□□□□□ -0.74
CHKA-205ENST00000530730 IFT172Q9UG01 1749 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 SBNO1A3KN83 1393 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 CYP11A1P05108 521 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 ITPKAP23677 461 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 VPS72Q15906 364 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 ZNF423Q2M1K9 1284 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 SHKBP1Q8TBC3 707 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 TRAK1Q9UPV9 953 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 FMN2Q9NZ56 1722 aa10.41□□□□□ -0.74
CHKA-205ENST00000530730 RAB3GAP2Q9H2M9 1393 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 B3GALT4O96024 378 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 SPRED3Q2MJR0 410 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 SGO2Q562F6 1265 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 USPL1Q5W0Q7 1092 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 DTX1Q86Y01 620 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 RETREG2Q8NC44 543 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 HIRIP3Q9BW71 556 aaPredicted RBP10.4□□□□□ -0.74
CHKA-205ENST00000530730 KNDC1Q76NI1 1749 aa10.4□□□□□ -0.74
CHKA-205ENST00000530730 TNS3Q68CZ2 1445 aa10.4□□□□□ -0.75
CHKA-205ENST00000530730 SOX4Q06945 474 aaPredicted RBP10.39□□□□□ -0.75
CHKA-205ENST00000530730 C2CD4AQ8NCU7 369 aaPredicted RBP10.39□□□□□ -0.75
CHKA-205ENST00000530730 CCER1Q8TC90 406 aaPredicted RBP10.39□□□□□ -0.75
CHKA-205ENST00000530730 DDX54Q8TDD1 881 aaKnown RBP10.39□□□□□ -0.75
CHKA-205ENST00000530730 EZH1Q92800 747 aaPredicted RBP10.39□□□□□ -0.75
CHKA-205ENST00000530730 ALKBH8Q96BT7 664 aaKnown RBP10.39□□□□□ -0.75
CHKA-205ENST00000530730 CCDC9Q9Y3X0 531 aaKnown RBP10.39□□□□□ -0.75
CHKA-205ENST00000530730 ARHGEF10O15013 1369 aa10.39□□□□□ -0.75
CHKA-205ENST00000530730 ORC1Q13415 861 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 PRPF40BQ6NWY9 871 aaKnown RBP10.38□□□□□ -0.75
CHKA-205ENST00000530730 DEFB132Q7Z7B7 95 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 GIMAP7Q8NHV1 300 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 RBCK1Q9BYM8 510 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 KRTAP9-2Q9BYQ4 174 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 ZNF576Q9H609 170 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 GLI3P10071 1580 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
CHKA-205ENST00000530730 PRR36Q9H6K5 1346 aa10.37□□□□□ -0.75
CHKA-205ENST00000530730 KRT27Q7Z3Y8 459 aa10.37□□□□□ -0.75
CHKA-205ENST00000530730 ANKARQ7Z5J8 1434 aa10.37□□□□□ -0.75
CHKA-205ENST00000530730 DMRTB1Q96MA1 342 aa10.37□□□□□ -0.75
CHKA-205ENST00000530730 NPHS2Q9NP85 383 aa10.37□□□□□ -0.75
CHKA-205ENST00000530730 MARF1Q9Y4F3 1742 aaKnown RBP10.37□□□□□ -0.75
CHKA-205ENST00000530730 SYNGAP1Q96PV0 1343 aa10.36□□□□□ -0.75
CHKA-205ENST00000530730 BLMP54132 1417 aaPredicted RBP10.36□□□□□ -0.75
CHKA-205ENST00000530730 FAM95CA0A1B0GW59 222 aa10.36□□□□□ -0.75
CHKA-205ENST00000530730 GPR182O15218 404 aa10.36□□□□□ -0.75
CHKA-205ENST00000530730 MAOBP27338 520 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms