RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 BSPRYQ5W0U4 402 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 PLEKHM3Q6ZWE6 761 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 VTI1AQ96AJ9 217 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 FOXD4Q12950 439 aaPredicted RBP13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 CCDC105Q8IYK2 499 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 TTC1Q99614 292 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 RNF41Q9H4P4 317 aaPredicted RBP13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 UBE3AQ05086 875 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 NME8Q8N427 588 aa13.98□□□□□ -0.17
PDE4DIP-227ENST00000529945 GRK2P25098 689 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 TUBB2AQ13885 445 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 EFCAB13Q8IY85 973 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 NECAB1Q8N987 351 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 NSMCE1Q8WV22 266 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 TUBB2BQ9BVA1 445 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 CNPY2Q9Y2B0 182 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 DYNC1I2Q13409 638 aaKnown RBP13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 ZKSCAN3Q9BRR0 538 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 WARS2Q9UGM6 360 aaKnown RBP13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 IFT88Q13099 833 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 PPP6R3Q5H9R7 873 aaPredicted RBP13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 GSDMAQ96QA5 445 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 ATP6V0A4Q9HBG4 840 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 CAVIN4Q5BKX8 364 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 TJAP1Q5JTD0 557 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 CEP85Q6P2H3 762 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 ANGPTL2Q9UKU9 493 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 NVLO15381 856 aaKnown RBP13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 IARSP41252 1262 aaKnown RBP13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 PARP2Q9UGN5 583 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 C20orf194Q5TEA3 1177 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 NOX5Q96PH1 765 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 RAB17Q9H0T7 212 aa13.97□□□□□ -0.17
PDE4DIP-227ENST00000529945 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 NFE2L2Q16236 605 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 METTL24Q5JXM2 366 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 EFCAB2Q5VUJ9 269 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 ACRBPQ8NEB7 543 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 SPDYE16A6NNV3 312 aaPredicted RBP13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 NOP56O00567 594 aaKnown RBP13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 GUCY2FP51841 1108 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 BCAS4Q8TDM0 211 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 CAPN1P07384 714 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 HS1BP3Q53T59 392 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 IQCDQ96DY2 449 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 NDEL1Q9GZM8 345 aa13.96□□□□□ -0.17
PDE4DIP-227ENST00000529945 PSMB7Q99436 277 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 HOMER3Q9NSC5 361 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 LMNB1P20700 586 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 TYRO3Q06418 890 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 KCNA1Q09470 495 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 PDCLQ13371 301 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 SLC12A1Q13621 1099 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 GDAP1L1Q96MZ0 367 aa13.96□□□□□ -0.18
PDE4DIP-227ENST00000529945 DONSONQ9NYP3 566 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 CYP26C1Q6V0L0 522 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 BBOF1Q8ND07 529 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 RAPGEF5Q92565 580 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 COG4Q9H9E3 785 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 SUN1O94901 812 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 SAT1P21673 171 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 CFAP221Q4G0U5 840 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 ATP6V1E2Q96A05 226 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 PDHA1P08559 390 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 ZFYVE19Q96K21 471 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 KAT14Q9H8E8 782 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 GAS2L2Q8NHY3 880 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 BOLA2Q9H3K6 86 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 RRAGDQ9NQL2 400 aaPredicted RBP13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 FAM95CA0A1B0GW59 222 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 ING2Q9H160 280 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 KIF1CO43896 1103 aaKnown RBP13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 LIN9Q5TKA1 542 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 NUTM2GQ5VZR2 741 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 KLHL29Q96CT2 875 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 NACA2Q9H009 215 aa13.95□□□□□ -0.18
PDE4DIP-227ENST00000529945 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 WDR44Q5JSH3 913 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 SPATA17Q96L03 361 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 GOLGA8KD6RF30 607 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 CALM1P0DP23 149 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 CALM2P0DP24 149 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 CALM3P0DP25 149 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 ENOX1Q8TC92 643 aaKnown RBP13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 LRRC8CQ8TDW0 803 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 RRP15Q9Y3B9 282 aaKnown RBP13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 SPDYE2BA6NHP3 402 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 SPDYE6P0CI01 402 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 CFAP70Q5T0N1 1121 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 FBXL13Q8NEE6 735 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 RSAD2Q8WXG1 361 aa13.94□□□□□ -0.18
PDE4DIP-227ENST00000529945 GGNBP2Q9H3C7 697 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms