RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CLRN2A0PK11 232 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 MINDY4BA8MYZ0 360 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 EPHX2P34913 555 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 EHD4Q9H223 541 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 FAM198AQ9UFP1 575 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 LIMCH1Q9UPQ0 1083 aa17.01■□□□□ 0.31
NR1H3-231ENST00000529540 CDK5RAP2Q96SN8 1893 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 DDX60LQ5H9U9 1706 aaKnown RBP17■□□□□ 0.31
NR1H3-231ENST00000529540 NFIAQ12857 509 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 AKNAD1Q5T1N1 836 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 RALYLQ86SE5 291 aaKnown RBP17■□□□□ 0.31
NR1H3-231ENST00000529540 HOOK2Q96ED9 719 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 KRT23Q9C075 422 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 GDPD2Q9HCC8 539 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
NR1H3-231ENST00000529540 SPTLC3Q9NUV7 552 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 PI4KBQ9UBF8 816 aa17■□□□□ 0.31
NR1H3-231ENST00000529540 LAMB1P07942 1786 aa16.99■□□□□ 0.31
NR1H3-231ENST00000529540 STX6O43752 255 aa16.99■□□□□ 0.31
NR1H3-231ENST00000529540 F13A1P00488 732 aa16.99■□□□□ 0.31
NR1H3-231ENST00000529540 GTF2F1P35269 517 aaKnown RBP eCLIP16.99■□□□□ 0.31
NR1H3-231ENST00000529540 HMGN5P82970 282 aaKnown RBP16.99■□□□□ 0.31
NR1H3-231ENST00000529540 ZSCAN29Q8IWY8 852 aaPredicted RBP16.99■□□□□ 0.31
NR1H3-231ENST00000529540 NCOA7Q8NI08 942 aa16.99■□□□□ 0.31
NR1H3-231ENST00000529540 FUCA2Q9BTY2 467 aa16.99■□□□□ 0.31
NR1H3-231ENST00000529540 SWAP70Q9UH65 585 aa16.99■□□□□ 0.31
NR1H3-231ENST00000529540 CNPY2Q9Y2B0 182 aa16.99■□□□□ 0.31
NR1H3-231ENST00000529540 TCP10L2B9ZVM9 353 aa16.98■□□□□ 0.31
NR1H3-231ENST00000529540 EGFRP00533 1210 aa16.98■□□□□ 0.31
NR1H3-231ENST00000529540 AK2P54819 239 aa16.98■□□□□ 0.31
NR1H3-231ENST00000529540 HAND2P61296 217 aa16.98■□□□□ 0.31
NR1H3-231ENST00000529540 TRPM4Q8TD43 1214 aa16.98■□□□□ 0.31
NR1H3-231ENST00000529540 NEK1Q96PY6 1258 aa16.98■□□□□ 0.31
NR1H3-231ENST00000529540 TAF1DQ9H5J8 278 aaPredicted RBP16.98■□□□□ 0.31
NR1H3-231ENST00000529540 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
NR1H3-231ENST00000529540 E7EWF7 191 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 CACNB3P54284 484 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 TCP10Q12799 353 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 RUFY3Q7L099 469 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 FOXP4Q8IVH2 680 aaPredicted RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 RASEFQ8IZ41 740 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 SAP30BPQ9UHR5 308 aaKnown RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 HERC5Q9UII4 1024 aaKnown RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 MYH1P12882 1939 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 ADCY5O95622 1261 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 TPM3P06753 285 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 FGRP09769 529 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 SYT1P21579 422 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 ANGEL2Q5VTE6 544 aaKnown RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 BLOC1S2Q6QNY1 142 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 ZSCAN31Q96LW9 406 aaPredicted RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 JAKMIP1Q96N16 626 aaKnown RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 CSRNP1Q96S65 589 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 USP25Q9UHP3 1055 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 SMC3Q9UQE7 1217 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 CYP46A1Q9Y6A2 500 aa16.97■□□□□ 0.31
NR1H3-231ENST00000529540 BAZ2AQ9UIF9 1905 aaKnown RBP16.97■□□□□ 0.31
NR1H3-231ENST00000529540 ORC4O43929 436 aa16.96■□□□□ 0.31
NR1H3-231ENST00000529540 KDM4AO75164 1064 aa16.96■□□□□ 0.31
NR1H3-231ENST00000529540 NOLC1Q14978 699 aaKnown RBP eCLIP16.96■□□□□ 0.31
NR1H3-231ENST00000529540 C16orf86Q6ZW13 317 aa16.96■□□□□ 0.31
NR1H3-231ENST00000529540 SMAP1Q8IYB5 467 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-231ENST00000529540 CRACR2BQ8N4Y2 399 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-231ENST00000529540 ESR2Q92731 530 aa16.96■□□□□ 0.31
NR1H3-231ENST00000529540 MTA3Q9BTC8 594 aa16.96■□□□□ 0.31
NR1H3-231ENST00000529540 SH2B1Q9NRF2 756 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-231ENST00000529540 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
NR1H3-231ENST00000529540 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 PDIA4P13667 645 aaKnown RBP16.95■□□□□ 0.3
NR1H3-231ENST00000529540 CASTP20810 708 aaKnown RBP16.95■□□□□ 0.3
NR1H3-231ENST00000529540 PLCD1P51178 756 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 HIRAP54198 1017 aaPredicted RBP16.95■□□□□ 0.3
NR1H3-231ENST00000529540 RASA3Q14644 834 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 DEFB129Q9H1M3 183 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 ZSWIM6Q9HCJ5 1215 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 PGAP2Q9UHJ9 254 aa16.95■□□□□ 0.3
NR1H3-231ENST00000529540 CTDSPL2Q05D32 466 aa16.94■□□□□ 0.3
NR1H3-231ENST00000529540 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
NR1H3-231ENST00000529540 TOMM22Q9NS69 142 aa16.94■□□□□ 0.3
NR1H3-231ENST00000529540 TBC1D12O60347 775 aa16.94■□□□□ 0.3
NR1H3-231ENST00000529540 GABPAQ06546 454 aa16.94■□□□□ 0.3
NR1H3-231ENST00000529540 SART3Q15020 963 aaKnown RBP16.94■□□□□ 0.3
NR1H3-231ENST00000529540 DHX32Q7L7V1 743 aaKnown RBP16.94■□□□□ 0.3
NR1H3-231ENST00000529540 ZNF444Q8N0Y2 327 aaPredicted RBP16.94■□□□□ 0.3
NR1H3-231ENST00000529540 NBPF3Q9H094 633 aa16.94■□□□□ 0.3
NR1H3-231ENST00000529540 MTMR6Q9Y217 621 aa16.94■□□□□ 0.3
NR1H3-231ENST00000529540 CYP2D7A0A087X1C5 515 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 DDTLA6NHG4 134 aaPredicted RBP16.93■□□□□ 0.3
NR1H3-231ENST00000529540 CYP2D6P10635 497 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 ANKRD1Q15327 319 aa16.93■□□□□ 0.3
NR1H3-231ENST00000529540 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms