RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 MCM9Q9NXL9 1143 aa14.6□□□□□ -0.07
TRAPPC4-209ENST00000528230 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.6□□□□□ -0.07
TRAPPC4-209ENST00000528230 TRIM17Q9Y577 477 aa14.6□□□□□ -0.07
TRAPPC4-209ENST00000528230 BAZ2AQ9UIF9 1905 aaKnown RBP14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 C19orf81C9J6K1 198 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 PLCD1P51178 756 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 GABPAQ06546 454 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 KIF22Q14807 665 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 TSHZ3Q63HK5 1081 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 CCDC84Q86UT8 332 aaPredicted RBP14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 SMC5Q8IY18 1101 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 EXOC6Q8TAG9 804 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 SDR42E1Q8WUS8 393 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 ZBTB21Q9ULJ3 1066 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 AGTPBP1Q9UPW5 1226 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 HPS5Q9UPZ3 1129 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 LOC285556D6RIA3 1793 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 ADGRA2Q96PE1 1338 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 SALL3Q9BXA9 1300 aa14.59□□□□□ -0.07
TRAPPC4-209ENST00000528230 RNF113AO15541 343 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 GNRH1P01148 92 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 BACE1P56817 501 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 JAG1P78504 1218 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 LACTBP83111 547 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 SLC4A8Q2Y0W8 1093 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 CERKLQ49MI3 558 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 OTUD7AQ8TE49 926 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 APPBP2Q92624 585 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 DDRGK1Q96HY6 314 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 PUS7LQ9H0K6 701 aaKnown RBP14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 STAP2Q9UGK3 403 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 PTPN22Q9Y2R2 807 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 MYH8P13535 1937 aa14.58□□□□□ -0.08
TRAPPC4-209ENST00000528230 USP17L10C9JJH3 530 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 PRKAB2O43741 272 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 GDF11O95390 407 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 CHGBP05060 677 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 SHMT1P34896 483 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 PABPC4Q13310 644 aaKnown RBP eCLIP14.57□□□□□ -0.085e-9■■□□□ 12.3
TRAPPC4-209ENST00000528230 AMOTL1Q8IY63 956 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 STRBPQ96SI9 672 aaKnown RBP14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 CABP5Q9NP86 173 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 SWAP70Q9UH65 585 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 CPA4Q9UI42 421 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 PNMA3Q9UL41 463 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 SLC4A4Q9Y6R1 1079 aa14.57□□□□□ -0.08
TRAPPC4-209ENST00000528230 GH2P01242 217 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 CYP2C8P10632 490 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 BCRP11274 1271 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 RGS19P49795 217 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 HMGCS2P54868 508 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 PRMT2P55345 433 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 CAP1Q01518 475 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 ABCB5Q2M3G0 1257 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 C12orf60Q5U649 245 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 GIMAP6Q6P9H5 292 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 TMOD4Q9NZQ9 345 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 MGAMO43451 1857 aa14.56□□□□□ -0.08
TRAPPC4-209ENST00000528230 IGHDP01880 384 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 GNAT2P19087 354 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 OSBPP22059 807 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 HOXA7P31268 230 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 PDE1AP54750 535 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 MTMR2Q13614 643 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 TREML2Q5T2D2 321 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 TICAM2Q86XR7 235 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 OSBP2Q969R2 916 aa14.55□□□□□ -0.08
TRAPPC4-209ENST00000528230 USP17L12C9JPN9 530 aa14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 USP17L21D6R901 530 aa14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 HOXD10P28358 340 aa14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 GCLCP48506 637 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 SHROOM1Q2M3G4 852 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 SBK1Q52WX2 424 aa14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 USP17L2Q6R6M4 530 aa14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 SMCR8Q8TEV9 937 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 FSD1Q9BTV5 496 aa14.54□□□□□ -0.08
TRAPPC4-209ENST00000528230 GSG1L2A8MUP6 293 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 GPAA1O43292 621 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 CYP2D6P10635 497 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 PSMC4P43686 418 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 USP14P54578 494 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 NUCB1Q02818 461 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 RAB3GAP1Q15042 981 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 CTR9Q6PD62 1173 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 C12orf42Q96LP6 360 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 CCDC17Q96LX7 622 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 LNPKQ9C0E8 428 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 ARHGAP39Q9C0H5 1083 aa14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 ARPP21Q9UBL0 812 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC4-209ENST00000528230 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.08
TRAPPC4-209ENST00000528230 PATL2C9JE40 543 aaKnown RBP14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 GUCY1A2P33402 732 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 CDK8P49336 464 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 EVX2Q03828 476 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 ZMYM1Q5SVZ6 1142 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 TMEM179Q6ZVK1 233 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 C16orf86Q6ZW13 317 aa14.52□□□□□ -0.09
TRAPPC4-209ENST00000528230 CHD1LQ86WJ1 897 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms