RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 LETM1O95202 739 aaPredicted RBP22.46■■□□□ 1.19
TM9SF1-203ENST00000524835 POLR3DP05423 398 aaPredicted RBP22.46■■□□□ 1.19
TM9SF1-203ENST00000524835 MYSM1Q5VVJ2 828 aa22.46■■□□□ 1.19
TM9SF1-203ENST00000524835 RCSD1Q6JBY9 416 aa22.46■■□□□ 1.19
TM9SF1-203ENST00000524835 CMTR1Q8N1G2 835 aaKnown RBP22.46■■□□□ 1.19
TM9SF1-203ENST00000524835 MXD3Q9BW11 206 aa22.46■■□□□ 1.19
TM9SF1-203ENST00000524835 RTEL1Q9NZ71 1219 aa22.46■■□□□ 1.19
TM9SF1-203ENST00000524835 CALM1P0DP23 149 aa22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 CALM2P0DP24 149 aa22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 CALM3P0DP25 149 aa22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 FUT2Q10981 343 aa22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 SF3B2Q13435 895 aaKnown RBP22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 NASPP49321 788 aaPredicted RBP22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 PODNQ7Z5L7 613 aa22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 TTF2Q9UNY4 1162 aaKnown RBP22.45■■□□□ 1.18
TM9SF1-203ENST00000524835 DEXIO95424 95 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 TFAP4Q01664 338 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 TRIM29Q14134 588 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 KLHL34Q8N239 644 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 CCDC82Q8N4S0 544 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 SLC44A5Q8NCS7 719 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 RNF26Q9BY78 433 aaPredicted RBP22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 TSPY26PQ9H489 355 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 DBNDD1Q9H9R9 158 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 IL17RBQ9NRM6 502 aa22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 RBM28Q9NW13 759 aaKnown RBP22.44■■□□□ 1.18
TM9SF1-203ENST00000524835 F8W031 263 aaPredicted RBP22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 POLR3EQ9NVU0 708 aa22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 ADAMTSL1Q8N6G6 1762 aa22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 G3V3G9 751 aa22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 U2AF2P26368 475 aaKnown RBP eCLIP22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 DCAF8Q5TAQ9 597 aa22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 BICD2Q8TD16 824 aa22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 MKNK2Q9HBH9 465 aa22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 DACT1Q9NYF0 836 aa22.43■■□□□ 1.18
TM9SF1-203ENST00000524835 MYH1P12882 1939 aa22.42■■□□□ 1.18
TM9SF1-203ENST00000524835 RASA1P20936 1047 aa22.42■■□□□ 1.18
TM9SF1-203ENST00000524835 C16orf86Q6ZW13 317 aa22.42■■□□□ 1.18
TM9SF1-203ENST00000524835 ANKS1AQ92625 1134 aa22.42■■□□□ 1.18
TM9SF1-203ENST00000524835 ZNF219Q9P2Y4 722 aaPredicted RBP22.42■■□□□ 1.18
TM9SF1-203ENST00000524835 CLIC4Q9Y696 253 aa22.42■■□□□ 1.18
TM9SF1-203ENST00000524835 SCN9AQ15858 1988 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 PLEKHA8P1O95397 391 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 YEATS4O95619 227 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 TMTC3Q6ZXV5 915 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 DGKHQ86XP1 1220 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 LINC00301Q8NCQ3 95 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 KCNQ5Q9NR82 932 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 TCP11L1Q9NUJ3 509 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 MMP1P03956 469 aa22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 DDX19AQ9NUU7 478 aaKnown RBP22.41■■□□□ 1.18
TM9SF1-203ENST00000524835 HHIPL2Q6UWX4 724 aa22.4■■□□□ 1.18
TM9SF1-203ENST00000524835 FUCA2Q9BTY2 467 aa22.4■■□□□ 1.18
TM9SF1-203ENST00000524835 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.4■■□□□ 1.18
TM9SF1-203ENST00000524835 NUP62CLQ9H1M0 184 aa22.4■■□□□ 1.18
TM9SF1-203ENST00000524835 ZNF287Q9HBT7 754 aa22.4■■□□□ 1.18
TM9SF1-203ENST00000524835 TAOK2Q9UL54 1235 aa22.4■■□□□ 1.18
TM9SF1-203ENST00000524835 MYH6P13533 1939 aa22.4■■□□□ 1.18
TM9SF1-203ENST00000524835 ECE2O60344 883 aa22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 NR1I2O75469 434 aa22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 WDHD1O75717 1129 aaPredicted RBP22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 CDK8P49336 464 aa22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 SCNN1DP51172 638 aa22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 PKN1Q16512 942 aa22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 CC2D2BQ6DHV5 1058 aa22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 ZNF444Q8N0Y2 327 aaPredicted RBP22.39■■□□□ 1.18
TM9SF1-203ENST00000524835 USP17L3A6NCW0 530 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 USP17L4A6NCW7 530 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 PRPF3O43395 683 aaKnown RBP22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 TSPY3P0CV98 308 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 TSPY8P0CW00 308 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 FKBP1AP62942 108 aaKnown RBP22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 DACT2Q5SW24 774 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 STRIP1Q5VSL9 837 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 ANO1Q5XXA6 986 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 USP17L1Q7RTZ2 530 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 CTCFLQ8NI51 663 aaPredicted RBP22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 KCNG4Q8TDN1 519 aa22.39■■□□□ 1.17
TM9SF1-203ENST00000524835 CNTNAP5Q8WYK1 1306 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 ME1P48163 572 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 CCDC178Q5BJE1 867 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 TEKT1Q969V4 418 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 SHISA4Q96DD7 197 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 CLSTN2Q9H4D0 955 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 PCDHA7Q9UN72 937 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 KCNJ14Q9UNX9 436 aa22.38■■□□□ 1.17
TM9SF1-203ENST00000524835 KIAA2012Q0VF49 1180 aa22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 GNL2Q13823 731 aaKnown RBP22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 STK38Q15208 465 aa22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 APOBEC3HQ6NTF7 200 aaKnown RBP22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 SRBD1Q8N5C6 995 aaKnown RBP22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 GOLPH3LQ9H4A5 285 aa22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 KAT14Q9H8E8 782 aa22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 DDX4Q9NQI0 724 aaKnown RBP22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 AKAP17AQ02040 695 aaKnown RBP22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 AOC3Q16853 763 aa22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 NOSTRINQ8IVI9 506 aa22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 CCAR1Q8IX12 1150 aaKnown RBP22.37■■□□□ 1.17
TM9SF1-203ENST00000524835 DIS3L2Q8IYB7 885 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms