RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 DPYDQ12882 1025 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 GPS2Q13227 327 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 BEND6Q5SZJ8 279 aaPredicted RBP15□□□□□ -0.01
CAPN1-202ENST00000524773 TPM1P09493 284 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 JAKMIP3Q5VZ66 844 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 PPP1R3FQ6ZSY5 799 aaPredicted RBP15□□□□□ -0.01
CAPN1-202ENST00000524773 SRGAP1Q7Z6B7 1085 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 VPS16Q9H269 839 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 ARMT1Q9H993 441 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 GPR108Q9NPR9 543 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 HDAC6Q9UBN7 1215 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 TUBB4AP04350 444 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 MORC3Q14149 939 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 LDHAL6AQ6ZMR3 332 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 PPFIBP1Q86W92 1011 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 GSPT2Q8IYD1 628 aaKnown RBP15□□□□□ -0.01
CAPN1-202ENST00000524773 FBXL16Q8N461 479 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 RIN2Q8WYP3 895 aaPredicted RBP15□□□□□ -0.01
CAPN1-202ENST00000524773 GREM2Q9H772 168 aa15□□□□□ -0.01
CAPN1-202ENST00000524773 CPLX2Q6PUV4 134 aaKnown RBP14.99□□□□□ -0.01
CAPN1-202ENST00000524773 SLF1Q9BQI6 1058 aa14.99□□□□□ -0.01
CAPN1-202ENST00000524773 KIF5CO60282 957 aa14.99□□□□□ -0.01
CAPN1-202ENST00000524773 SRGAP2O75044 1071 aa14.99□□□□□ -0.01
CAPN1-202ENST00000524773 ADD2P35612 726 aa14.99□□□□□ -0.01
CAPN1-202ENST00000524773 MRPS25P82663 173 aaKnown RBP14.99□□□□□ -0.01
CAPN1-202ENST00000524773 FCHSD1Q86WN1 690 aa14.99□□□□□ -0.01
CAPN1-202ENST00000524773 SHISA4Q96DD7 197 aa14.99□□□□□ -0.01
CAPN1-202ENST00000524773 EPB41L4AQ9HCS5 686 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-202ENST00000524773 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 ACTN4O43707 911 aaKnown RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 APTXQ7Z2E3 356 aaKnown RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 MIGA1Q8NAN2 632 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 ENOX1Q8TC92 643 aaKnown RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 AK7Q96M32 723 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 CNNM1Q9NRU3 951 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 VPS54Q9P1Q0 977 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 IQSEC3Q9UPP2 1182 aaPredicted RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 RRP15Q9Y3B9 282 aaKnown RBP14.98□□□□□ -0.01
CAPN1-202ENST00000524773 CDKL5O76039 1030 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 AIDAQ96BJ3 306 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 ADAMTS7Q9UKP4 1686 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 ARFGEF2Q9Y6D5 1785 aa14.98□□□□□ -0.01
CAPN1-202ENST00000524773 CCDC151A5D8V7 595 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 LRRIQ3A6PVS8 624 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-202ENST00000524773 MAP2K7O14733 419 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 MBD4O95243 580 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 MMP1P03956 469 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 GYPCP04921 128 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 PDE6AP16499 860 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 ERVK-24P63145 666 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 AKAP17AQ02040 695 aaKnown RBP14.97□□□□□ -0.01
CAPN1-202ENST00000524773 CAPZA3Q96KX2 299 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 CTNND2Q9UQB3 1225 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 CAMTA1Q9Y6Y1 1673 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 PES1O00541 588 aaKnown RBP14.97□□□□□ -0.01
CAPN1-202ENST00000524773 ZFYP08048 801 aaPredicted RBP14.97□□□□□ -0.01
CAPN1-202ENST00000524773 PTPREP23469 700 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 RASSF4Q9H2L5 321 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 CDC23Q9UJX2 597 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 A0A1B0GTH6 734 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 SARSP49591 514 aaKnown RBP14.97□□□□□ -0.01
CAPN1-202ENST00000524773 FAM193AP78312 1265 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 FKBP15Q5T1M5 1219 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 MAGEB6Q8N7X4 407 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 MLKLQ8NB16 471 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 CHP1Q99653 195 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 TAB2Q9NYJ8 693 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 GUCA1BQ9UMX6 200 aa14.97□□□□□ -0.01
CAPN1-202ENST00000524773 BAZ2BQ9UIF8 2168 aaKnown RBP14.96□□□□□ -0.01
CAPN1-202ENST00000524773 SOS2Q07890 1332 aaPredicted RBP14.96□□□□□ -0.01
CAPN1-202ENST00000524773 ITGA6P23229 1130 aa14.96□□□□□ -0.01
CAPN1-202ENST00000524773 PLCD1P51178 756 aa14.96□□□□□ -0.01
CAPN1-202ENST00000524773 ZNF174Q15697 407 aa14.96□□□□□ -0.01
CAPN1-202ENST00000524773 HOOK1Q9UJC3 728 aaKnown RBP14.96□□□□□ -0.01
CAPN1-202ENST00000524773 AKAP2Q9Y2D5 859 aa14.96□□□□□ -0.01
CAPN1-202ENST00000524773 SYNRGQ9UMZ2 1314 aa14.96□□□□□ -0.01
CAPN1-202ENST00000524773 FAM237AA0A1B0GTK4 181 aa14.96□□□□□ -0.02
CAPN1-202ENST00000524773 CIAO1O76071 339 aa14.96□□□□□ -0.02
CAPN1-202ENST00000524773 ACTN2P35609 894 aa14.96□□□□□ -0.02
CAPN1-202ENST00000524773 PDE4CQ08493 712 aa14.96□□□□□ -0.02
CAPN1-202ENST00000524773 CASP8Q14790 479 aa14.96□□□□□ -0.02
CAPN1-202ENST00000524773 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.02
CAPN1-202ENST00000524773 NAPBQ9H115 298 aa14.96□□□□□ -0.02
CAPN1-202ENST00000524773 CTAGE9A4FU28 777 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 GOLGA6L9A6NEM1 432 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 HLFQ16534 295 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 MUM1L1Q5H9M0 696 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 SRLQ86TD4 932 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 SYMPKQ92797 1274 aaKnown RBP14.95□□□□□ -0.02
CAPN1-202ENST00000524773 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.95□□□□□ -0.027e-7■■■■□ 19.9
CAPN1-202ENST00000524773 L1RE1Q9UN81 338 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 GOLGA5Q8TBA6 731 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 EXOC4Q96A65 974 aa14.95□□□□□ -0.02
CAPN1-202ENST00000524773 STRBPQ96SI9 672 aaKnown RBP14.95□□□□□ -0.02
CAPN1-202ENST00000524773 NUP88Q99567 741 aaPredicted RBP14.95□□□□□ -0.02
CAPN1-202ENST00000524773 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms