RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 BMP4P12644 408 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 NFKB1P19838 968 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 IL13P35225 146 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 MAPK8P45983 427 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 CNGB1Q14028 1251 aaPredicted RBP7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 GAS6Q14393 721 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 BHMTQ93088 406 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 BCL2L13Q9BXK5 485 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 SLC52A2Q9HAB3 445 aa7.08□□□□□ -1.28
CTNNA1-239ENST00000523685 KIAA1551Q9HCM1 1747 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 C2CD2LO14523 706 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 RNMTO43148 476 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 PHACTR2O75167 634 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 MAP3K6O95382 1288 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 RARAP10276 462 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 CANXP27824 592 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 TM4SF1P30408 202 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 FSTL1Q12841 308 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 NFIXQ14938 502 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 AKAP4Q5JQC9 854 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 PMEPA1Q969W9 287 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 CSRNP1Q96S65 589 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 DNAJC25Q9H1X3 360 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 ZFATQ9P243 1243 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 FOXD3Q9UJU5 478 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 NSFL1CQ9UNZ2 370 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 ZBTB1Q9Y2K1 713 aa7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 COL5A3P25940 1745 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-239ENST00000523685 KIF13BQ9NQT8 1826 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 SOS1Q07889 1333 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 RBM47A0AV96 593 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 EIF1AYO14602 144 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 MMP20O60882 483 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 CPNE3O75131 537 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 SERPINB2P05120 415 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 CYP19A1P11511 503 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 NFX1Q12986 1120 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 ORC1Q13415 861 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 ENOX2Q16206 610 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 FBXO33Q7Z6M2 555 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 RAB44Q7Z6P3 723 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 C2CD5Q86YS7 1000 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 C1orf127Q8N9H9 656 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 SMC1BQ8NDV3 1235 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 IRF7Q92985 503 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 COL25A1Q9BXS0 654 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 ZFYVE28Q9HCC9 887 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 MBIPQ9NS73 344 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 TLR7Q9NYK1 1049 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 CNTN3Q9P232 1028 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 COL15A1P39059 1388 aa7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 MYH14Q7Z406 1995 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-239ENST00000523685 ERBB4Q15303 1308 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 PNMA6FA0A0J9YX94 578 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 PSAPP07602 524 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 LMNB1P20700 586 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 FGD1P98174 961 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 MTHFSDQ2M296 383 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 CC2D1BQ5T0F9 858 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 COL13A1Q5TAT6 717 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 ZNF468Q5VIY5 522 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 SYT9Q86SS6 491 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 TTC5Q8N0Z6 440 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 TTLL6Q8N841 843 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 OR13H1Q8NG92 308 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 GIPC2Q8TF65 315 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 ZNF622Q969S3 477 aaKnown RBP eCLIP7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 AVENQ9NQS1 362 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 NARFQ9UHQ1 456 aa7.05□□□□□ -1.28
CTNNA1-239ENST00000523685 ZNF831Q5JPB2 1677 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 H0YIN7 160 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 NPHP1O15259 732 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 LDHBP07195 334 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 VEGFAP15692 232 aaPredicted RBP7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 CES1P23141 567 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 MAP2K3P46734 347 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 PRELPP51888 382 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 ATP2B2Q01814 1243 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 DHX32Q7L7V1 743 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 CARMIL3Q8ND23 1372 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 TJP1Q07157 1748 aa7.04□□□□□ -1.28
CTNNA1-239ENST00000523685 GLTPD2A6NH11 291 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 PHF20L1A8MW92 1017 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 U2SURPO15042 1029 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 DIAPH1O60610 1272 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 SIN3BO75182 1162 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 STARD3NLO95772 234 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 CYP2E1P05181 493 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 ARAFP10398 606 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 ZNF16P17020 682 aaPredicted RBP7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 SOX18P35713 384 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 PCBP4P57723 403 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 TAGLNQ01995 201 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 PLAURQ03405 335 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 RNFT1Q5M7Z0 435 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 TBC1D9BQ66K14 1250 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 ALG1LQ6GMV1 187 aa7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 NPM2Q86SE8 214 aaKnown RBP7.03□□□□□ -1.28
CTNNA1-239ENST00000523685 JMYQ8N9B5 988 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms