RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 MYBP10242 640 aa9.5□□□□□ -0.89
CSMD1-213ENST00000523488 GHRP10912 638 aa9.5□□□□□ -0.89
CSMD1-213ENST00000523488 KARSQ15046 597 aaKnown RBP9.5□□□□□ -0.89
CSMD1-213ENST00000523488 KIAA0753Q2KHM9 967 aa9.5□□□□□ -0.89
CSMD1-213ENST00000523488 MTHFSDQ2M296 383 aaKnown RBP9.5□□□□□ -0.89
CSMD1-213ENST00000523488 KAT14Q9H8E8 782 aa9.5□□□□□ -0.89
CSMD1-213ENST00000523488 ANO9A1A5B4 782 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 LCA5LO95447 670 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 FBLN1P23142 703 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 SEMA3FQ13275 785 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 NBPF9Q3BBW0 867 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 CCNI2Q6ZMN8 369 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 NME9Q86XW9 330 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 CENPHQ9H3R5 247 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 ATP8B3O60423 1300 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 STK36Q9NRP7 1315 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 TNRC6CQ9HCJ0 1690 aaKnown RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 DNAJC8O75937 253 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 CCT5P48643 541 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 CDK17Q00537 523 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 MEA1Q16626 185 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 FBXW10Q5XX13 1052 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 WWC2Q6AWC2 1192 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 ZNF589Q86UQ0 364 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 ZNF483Q8TF39 744 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 TCP11Q8WWU5 503 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 BATF3Q9NR55 127 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 ADD3Q9UEY8 706 aaKnown RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 HPS5Q9UPZ3 1129 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 ZMYM6O95789 1325 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 MFAP3LO75121 409 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 UBTFL1P0CB47 393 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 NEFHP12036 1026 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 RFX5P48382 616 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 APBA1Q02410 837 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 ALS2CLQ60I27 953 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 SAMD1Q6SPF0 538 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 REXO2Q9Y3B8 237 aaKnown RBP9.49□□□□□ -0.89
CSMD1-213ENST00000523488 RGPD5Q99666 1765 aa9.49□□□□□ -0.89
CSMD1-213ENST00000523488 CCDC175P0C221 793 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 PFKFB1P16118 471 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 BIRC2Q13490 618 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 SHC4Q6S5L8 630 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 CCDC50Q8IVM0 306 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 FAM227BQ96M60 508 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 ANKRD27Q96NW4 1050 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 VEZTQ9HBM0 779 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 MYH3P11055 1940 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 FOXP2O15409 715 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 SLC3A2P08195 630 aaKnown RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 RXRBP28702 533 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 NAP1L1P55209 391 aaKnown RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 RABL6Q3YEC7 729 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 B4GALNT4Q76KP1 1039 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 OR8K1Q8NGG5 319 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 MKL1Q969V6 931 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 NEK1Q96PY6 1258 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 RABEP2Q9H5N1 569 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 ACTR5Q9H9F9 607 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 CAPN7Q9Y6W3 813 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 METP08581 1390 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 KIF5CO60282 957 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 CYP21A2P08686 494 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 PDIA3P30101 505 aaKnown RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 CDC27P30260 824 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 PDIA5Q14554 519 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 CRACR2AQ9BSW2 395 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 SIL1Q9H173 461 aa9.48□□□□□ -0.89
CSMD1-213ENST00000523488 LIMA1Q9UHB6 759 aaKnown RBP9.48□□□□□ -0.89
CSMD1-213ENST00000523488 PTPDC1A2A3K4 754 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 CDR1P51861 262 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 PDE4BQ07343 736 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 GOLGA8FQ08AF8 430 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 GOLGA8DPQ0D2H9 430 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 MCM10Q7L590 875 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 DHX32Q7L7V1 743 aaKnown RBP9.47□□□□□ -0.89
CSMD1-213ENST00000523488 GPATCH3Q96I76 525 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 MYH7BA7E2Y1 1941 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 AKAP17AQ02040 695 aaKnown RBP9.47□□□□□ -0.89
CSMD1-213ENST00000523488 KIF23Q02241 960 aaPredicted RBP9.47□□□□□ -0.89
CSMD1-213ENST00000523488 STK38Q15208 465 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 MLKLQ8NB16 471 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 PIK3R5Q8WYR1 880 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 DNAJC7Q99615 494 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 MOV10L1Q9BXT6 1211 aaKnown RBP9.47□□□□□ -0.89
CSMD1-213ENST00000523488 SUGCTQ9HAC7 445 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 UBN2Q6ZU65 1347 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 SCP2P22307 547 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 SYNE3Q6ZMZ3 975 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 IQCKQ8N0W5 287 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
CSMD1-213ENST00000523488 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms