RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 RCSD1Q6JBY9 416 aa19.58■□□□□ 0.72
SREK1-212ENST00000522912 AMOTL1Q8IY63 956 aa19.58■□□□□ 0.72
SREK1-212ENST00000522912 CNKSR1Q969H4 720 aa19.58■□□□□ 0.72
SREK1-212ENST00000522912 ADAMTSL1Q8N6G6 1762 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 G3V3G9 751 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 LETM1O95202 739 aaPredicted RBP19.57■□□□□ 0.72
SREK1-212ENST00000522912 TFAP4Q01664 338 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 DCAF8Q5TAQ9 597 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 MYSM1Q5VVJ2 828 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 TRIM22Q8IYM9 498 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 SLC44A5Q8NCS7 719 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 C7orf43Q8WVR3 580 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 DBNDD1Q9H9R9 158 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 KCNQ5Q9NR82 932 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 RTEL1Q9NZ71 1219 aa19.57■□□□□ 0.72
SREK1-212ENST00000522912 SCN9AQ15858 1988 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 NASPP49321 788 aaPredicted RBP19.56■□□□□ 0.72
SREK1-212ENST00000522912 FUT2Q10981 343 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
SREK1-212ENST00000522912 WASF1Q92558 559 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 TSPY26PQ9H489 355 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 IL17RBQ9NRM6 502 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
SREK1-212ENST00000522912 ZNF646O15015 1829 aaPredicted RBP19.56■□□□□ 0.72
SREK1-212ENST00000522912 DDAH1O94760 285 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 MKNK2Q9HBH9 465 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 CLIC4Q9Y696 253 aa19.56■□□□□ 0.72
SREK1-212ENST00000522912 DEXIO95424 95 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 CALM1P0DP23 149 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 CALM2P0DP24 149 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 CALM3P0DP25 149 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 TRIM29Q14134 588 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 PODNQ7Z5L7 613 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 BICD2Q8TD16 824 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 DACT1Q9NYF0 836 aa19.55■□□□□ 0.72
SREK1-212ENST00000522912 PLEKHA8P1O95397 391 aa19.54■□□□□ 0.72
SREK1-212ENST00000522912 RBM28Q9NW13 759 aaKnown RBP19.54■□□□□ 0.72
SREK1-212ENST00000522912 SNED1Q8TER0 1413 aa19.54■□□□□ 0.72
SREK1-212ENST00000522912 RASA1P20936 1047 aa19.54■□□□□ 0.72
SREK1-212ENST00000522912 U2AF2P26368 475 aaKnown RBP eCLIP19.54■□□□□ 0.723e-10■■■□□ 14.9
SREK1-212ENST00000522912 NT5C2P49902 561 aa19.54■□□□□ 0.72
SREK1-212ENST00000522912 SCNN1DP51172 638 aa19.54■□□□□ 0.72
SREK1-212ENST00000522912 LINC00301Q8NCQ3 95 aa19.54■□□□□ 0.72
SREK1-212ENST00000522912 RNF26Q9BY78 433 aaPredicted RBP19.54■□□□□ 0.72
SREK1-212ENST00000522912 POLR3EQ9NVU0 708 aa19.54■□□□□ 0.72
SREK1-212ENST00000522912 USP17L3A6NCW0 530 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 USP17L4A6NCW7 530 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 NR1I2O75469 434 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 CDK8P49336 464 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 C16orf86Q6ZW13 317 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 USP17L1Q7RTZ2 530 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 ANKS1AQ92625 1134 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.53■□□□□ 0.72
SREK1-212ENST00000522912 C10orf71Q711Q0 1435 aa19.53■□□□□ 0.72
SREK1-212ENST00000522912 PKN1Q16512 942 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 TMTC3Q6ZXV5 915 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 ZNF444Q8N0Y2 327 aaPredicted RBP19.52■□□□□ 0.72
SREK1-212ENST00000522912 FUCA2Q9BTY2 467 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 NUP62CLQ9H1M0 184 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 KCNJ14Q9UNX9 436 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 ECE2O60344 883 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 MMP1P03956 469 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 DGKHQ86XP1 1220 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 SHISA4Q96DD7 197 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 TCP11L1Q9NUJ3 509 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 DDX19AQ9NUU7 478 aaKnown RBP19.52■□□□□ 0.72
SREK1-212ENST00000522912 PCDHA7Q9UN72 937 aa19.52■□□□□ 0.72
SREK1-212ENST00000522912 PRPF3O43395 683 aaKnown RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 YEATS4O95619 227 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 TSPY3P0CV98 308 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 TSPY8P0CW00 308 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 ME1P48163 572 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 STK38Q15208 465 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 CAMK4Q16566 473 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 ANO1Q5XXA6 986 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 HHIPL2Q6UWX4 724 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 CCAR1Q8IX12 1150 aaKnown RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 GOLPH3LQ9H4A5 285 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 BAZ2BQ9UIF8 2168 aaKnown RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 WDHD1O75717 1129 aaPredicted RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 SRBD1Q8N5C6 995 aaKnown RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 RNF214Q8ND24 703 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 CLSTN2Q9H4D0 955 aa19.51■□□□□ 0.71
SREK1-212ENST00000522912 DDX4Q9NQI0 724 aaKnown RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 V9GY48 417 aaPredicted RBP19.51■□□□□ 0.71
SREK1-212ENST00000522912 CNTNAP5Q8WYK1 1306 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 hCG_1642624A0A1W2PR95 340 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 BTBD18B2RXH4 712 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 PICALMQ13492 652 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 AOC3Q16853 763 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 DACT2Q5SW24 774 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 STRIP1Q5VSL9 837 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 APOBEC3HQ6NTF7 200 aaKnown RBP19.5■□□□□ 0.71
SREK1-212ENST00000522912 CTCFLQ8NI51 663 aaPredicted RBP19.5■□□□□ 0.71
SREK1-212ENST00000522912 KAT14Q9H8E8 782 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 USP40Q9NVE5 1235 aa19.5■□□□□ 0.71
SREK1-212ENST00000522912 SPTLC2O15270 562 aa19.49■□□□□ 0.71
SREK1-212ENST00000522912 AKAP17AQ02040 695 aaKnown RBP19.49■□□□□ 0.71
SREK1-212ENST00000522912 CCDC178Q5BJE1 867 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms