RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CAMK2GQ13555 558 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 BNC2Q6ZN30 1099 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 USP48Q86UV5 1035 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 VSIG10LQ86VR7 867 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 RELL1Q8IUW5 271 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 ZNF654Q8IZM8 581 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 NETO1Q8TDF5 533 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 RASGRP4Q8TDF6 673 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 BCL7CQ8WUZ0 217 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 ARMC5Q96C12 935 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 RHOVQ96L33 236 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 CCSER2Q9H7U1 834 aa7.43□□□□□ -1.22
HMGB1P1-201ENST00000522557 MINDY4BA8MYZ0 360 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 FGRP09769 529 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 GARTP22102 1010 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 GBP2P32456 591 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 SPRED2Q7Z698 418 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 HID1Q8IV36 788 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 TP53INP2Q8IXH6 220 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 ABI1Q8IZP0 508 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 FLCNQ8NFG4 579 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 FOXQ1Q9C009 403 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 CNTNAP4Q9C0A0 1308 aa7.42□□□□□ -1.22
HMGB1P1-201ENST00000522557 SLITRK5O94991 958 aa7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 RPL6Q02878 288 aaKnown RBP7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 LMNB2Q03252 620 aa7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 ZNF574Q6ZN55 896 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 ARHGAP27Q6ZUM4 889 aa7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 WFDC3Q8IUB2 231 aa7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 TMEM74Q96NL1 305 aa7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 PAK6Q9NQU5 681 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 GGT7Q9UJ14 662 aa7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 SLC5A6Q9Y289 635 aa7.41□□□□□ -1.22
HMGB1P1-201ENST00000522557 FAM221AA4D161 298 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 F13A1P00488 732 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 ITIH2P19823 946 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 CD96P40200 585 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 IRAK1P51617 712 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 FAM160A1Q05DH4 1040 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 PRAMEF13Q5VWM6 474 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 XAGE3Q8WTP9 111 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 FBXL18Q96ME1 805 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 MIPEPQ99797 713 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 MKNK2Q9HBH9 465 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 KBTBD4Q9NVX7 518 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 TJP2Q9UDY2 1190 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 ADAMTS1Q9UHI8 967 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 GTF2IRD1Q9UHL9 959 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 ADGRE2Q9UHX3 823 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 CORINQ9Y5Q5 1042 aa7.4□□□□□ -1.22
HMGB1P1-201ENST00000522557 CILPO75339 1184 aa7.39□□□□□ -1.23
HMGB1P1-201ENST00000522557 PGRP06401 933 aa7.39□□□□□ -1.23
HMGB1P1-201ENST00000522557 CEACAM5P06731 702 aa7.39□□□□□ -1.23
HMGB1P1-201ENST00000522557 CAP2P40123 477 aa7.39□□□□□ -1.23
HMGB1P1-201ENST00000522557 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
HMGB1P1-201ENST00000522557 TACC3Q9Y6A5 838 aa7.39□□□□□ -1.23
HMGB1P1-201ENST00000522557 IGF2BP3O00425 579 aaKnown RBP eCLIP7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 CST3P01034 146 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 CD8BP10966 210 aa7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 IFI16Q16666 785 aaKnown RBP7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 AOC3Q16853 763 aa7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 MCF2L2Q86YR7 1114 aa7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 MFSD2AQ8NA29 543 aa7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 GATAD2BQ8WXI9 593 aa7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 DPH2Q9BQC3 489 aaPredicted RBP7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 CAPN10Q9HC96 672 aa7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 VAV3Q9UKW4 847 aa7.38□□□□□ -1.23
HMGB1P1-201ENST00000522557 COL17A1Q9UMD9 1497 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 PRR33A8MZF0 331 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 GREM1O60565 184 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 TAL1P17542 331 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 ATF4P18848 351 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 PRKCQQ04759 706 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 PAK2Q13177 524 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 PWP1Q13610 501 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 NKPD1Q17RQ9 610 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 MCTP1Q6DN14 999 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 LETMD1Q6P1Q0 360 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 STK11IPQ8N1F8 1099 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 GOLM1Q8NBJ4 401 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 ACSF2Q96CM8 615 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 TMEM87BQ96K49 555 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 TNKS2Q9H2K2 1166 aa7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 PRDM5Q9NQX1 630 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 TPX2Q9ULW0 747 aaKnown RBP7.37□□□□□ -1.23
HMGB1P1-201ENST00000522557 TMEM265A0A087WTH1 108 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 UPK3BL1B0FP48 263 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 UPK3BL2E5RIL1 263 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 BPNT1O95861 308 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 PDE4BQ07343 736 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 RBL2Q08999 1139 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 SLC6A19Q695T7 634 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 CDH24Q86UP0 819 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 MCATQ8IVS2 390 aaKnown RBP7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 SPACA3Q8IXA5 215 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 MRPL41Q8IXM3 137 aaKnown RBP7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 MISP3Q96FF7 219 aa7.36□□□□□ -1.23
HMGB1P1-201ENST00000522557 HRASLS5Q96KN8 279 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms