RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 CCDC116Q8IYX3 515 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 CRIPAKQ8N1N5 446 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 PPM1KQ8N3J5 372 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 CNTD1Q8N815 330 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 COG1Q8WTW3 980 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 DDX1Q92499 740 aaKnown RBP5.01□□□□□ -1.61
SKP1-209ENST00000522552 PMEPA1Q969W9 287 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 NECAB3Q96P71 396 aaPredicted RBP5.01□□□□□ -1.61
SKP1-209ENST00000522552 HERPUD2Q9BSE4 406 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 LUC7LQ9NQ29 371 aaKnown RBP5.01□□□□□ -1.61
SKP1-209ENST00000522552 GMPR2Q9P2T1 348 aaKnown RBP5.01□□□□□ -1.61
SKP1-209ENST00000522552 IP6K2Q9UHH9 426 aa5.01□□□□□ -1.61
SKP1-209ENST00000522552 ANO9A1A5B4 782 aa5□□□□□ -1.61
SKP1-209ENST00000522552 PRRT4C9JH25 899 aa5□□□□□ -1.61
SKP1-209ENST00000522552 TCERG1O14776 1098 aaKnown RBP5□□□□□ -1.61
SKP1-209ENST00000522552 NBNO60934 754 aa5□□□□□ -1.61
SKP1-209ENST00000522552 CILPO75339 1184 aa5□□□□□ -1.61
SKP1-209ENST00000522552 CASP2P42575 452 aa5□□□□□ -1.61
SKP1-209ENST00000522552 SYDE2Q5VT97 1194 aa5□□□□□ -1.61
SKP1-209ENST00000522552 SPATS2Q86XZ4 545 aaKnown RBP5□□□□□ -1.61
SKP1-209ENST00000522552 SLC7A3Q8WY07 619 aa5□□□□□ -1.61
SKP1-209ENST00000522552 TRMT2BQ96GJ1 504 aaKnown RBP5□□□□□ -1.61
SKP1-209ENST00000522552 HSH2DQ96JZ2 352 aa5□□□□□ -1.61
SKP1-209ENST00000522552 DHRS4Q9BTZ2 278 aa5□□□□□ -1.61
SKP1-209ENST00000522552 KLF16Q9BXK1 252 aaPredicted RBP5□□□□□ -1.61
SKP1-209ENST00000522552 MIR1-1HGQ9H1L0 117 aa5□□□□□ -1.61
SKP1-209ENST00000522552 LIN7BQ9HAP6 207 aa5□□□□□ -1.61
SKP1-209ENST00000522552 ATP13A2Q9NQ11 1180 aa5□□□□□ -1.61
SKP1-209ENST00000522552 PLCB1Q9NQ66 1216 aa5□□□□□ -1.61
SKP1-209ENST00000522552 SALL4Q9UJQ4 1053 aa5□□□□□ -1.61
SKP1-209ENST00000522552 SPEF1Q9Y4P9 236 aa5□□□□□ -1.61
SKP1-209ENST00000522552 IPPQ9Y573 584 aa5□□□□□ -1.61
SKP1-209ENST00000522552 ANP32CO43423 234 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 SUSD5O60279 629 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 BRINP1O60477 761 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 EDN3P14138 238 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 SMCPP49901 116 aaPredicted RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 GEMIN4P57678 1058 aaKnown RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 TMPRSS15P98073 1019 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 PCBP1Q15365 356 aaKnown RBP eCLIP4.99□□□□□ -1.61
SKP1-209ENST00000522552 DHCR24Q15392 516 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 COBLL1Q53SF7 1204 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 FAM209AQ5JX71 171 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 PKN3Q6P5Z2 889 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 LRRC69Q6ZNQ3 347 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 RINLQ6ZS11 566 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 TOGARAM2Q6ZUX3 1019 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 CXorf38Q8TB03 319 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 PSMG3-AS1Q96PY0 264 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 TCF12Q99081 682 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 SELENOOQ9BVL4 669 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 EHMT1Q9H9B1 1298 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 KANSL3Q9P2N6 904 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 LUC7L2Q9Y383 392 aaKnown RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 PCDHB14Q9Y5E9 798 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 IQCA1LA6NCM1 817 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 KHNYNO15037 678 aaKnown RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 FBXO21O94952 628 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 CYP2E1P05181 493 aaPredicted RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 PHKG2P15735 406 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 GUCY2CP25092 1073 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 GRNP28799 593 aaKnown RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 ZNF280AP59817 542 aaPredicted RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 MAP7Q14244 749 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 SAFBQ15424 915 aaKnown RBP eCLIP4.99□□□□□ -1.61
SKP1-209ENST00000522552 SEPT7Q16181 437 aaKnown RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 MINDY4Q4G0A6 757 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 VHLLQ6RSH7 139 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 TRIM46Q7Z4K8 759 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 ZNF354CQ86Y25 554 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 IFNL2Q8IZJ0 200 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 CCDC89Q8N998 374 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 KDF1Q8NAX2 398 aaPredicted RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 NGDNQ8NEJ9 315 aaKnown RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 ATXN2LQ8WWM7 1075 aaKnown RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 SCLT1Q96NL6 688 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 ANTXR1Q9H6X2 564 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 C9orf78Q9NZ63 289 aaPredicted RBP4.99□□□□□ -1.61
SKP1-209ENST00000522552 GTF2IRD1Q9UHL9 959 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 FAM50BQ9Y247 325 aa4.99□□□□□ -1.61
SKP1-209ENST00000522552 XYLBO75191 536 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 DNAJC8O75937 253 aaPredicted RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 CT47B1P0C2W7 299 aaPredicted RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 U2AF1L5P0DN76 240 aaPredicted RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 LMNB1P20700 586 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 U2AF1Q01081 240 aaKnown RBP eCLIP4.98□□□□□ -1.619e-7■■■■□ 24.3
SKP1-209ENST00000522552 CHAF1AQ13111 956 aaPredicted RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 GBX1Q14549 363 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 GRM3Q14832 879 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 NCAPHQ15003 741 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 PTPN21Q16825 1174 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 CCDC93Q567U6 631 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 C6orf118Q5T5N4 469 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 XP32Q5T750 250 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 RASIP1Q5U651 963 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
SKP1-209ENST00000522552 BTLAQ7Z6A9 289 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 CCNJLQ8IV13 435 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 AHI1Q8N157 1196 aa4.98□□□□□ -1.61
SKP1-209ENST00000522552 SDR16C5Q8N3Y7 309 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms