RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 TSC22D4Q9Y3Q8 395 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 DEAF1O75398 565 aaPredicted RBP17.06■□□□□ 0.32
UBR5-207ENST00000520539 GNA11P29992 359 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 PPP6R3Q5H9R7 873 aaPredicted RBP17.06■□□□□ 0.32
UBR5-207ENST00000520539 MBD2Q9UBB5 411 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 SAR1BQ9Y6B6 198 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 LIG3P49916 1009 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 GNGT1P63211 74 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 PPP2R1AP30153 589 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 TEDDM1Q5T9Z0 273 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 PIP4K2CQ8TBX8 421 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 F13A1P00488 732 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 GINS4Q9BRT9 223 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 STX19Q8N4C7 294 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 PPME1Q9Y570 386 aa17.06■□□□□ 0.32
UBR5-207ENST00000520539 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 PYGMP11217 842 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 PDE6BP35913 854 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 DTNBO60941 627 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 MMEP08473 750 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 ZBTB41Q5SVQ8 909 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 CATSPER1Q8NEC5 780 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
UBR5-207ENST00000520539 IFIH1Q9BYX4 1025 aaKnown RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 DNAJC25Q9H1X3 360 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 CALUO43852 315 aaPredicted RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 TMED10P49755 219 aaKnown RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 PRPF38AQ8NAV1 312 aaKnown RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 TEKT1Q969V4 418 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 RAB14P61106 215 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 GLT8D2Q9H1C3 349 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 NUTM2BA6NNL0 878 aaPredicted RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 NUTM2EB1AL46 878 aaPredicted RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 YWHAEP62258 255 aaKnown RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 MPP6Q9NZW5 540 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 GNGT2O14610 69 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 BCAS4Q8TDM0 211 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 SNX29Q8TEQ0 813 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 THAP12O43422 761 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 PEX26Q7Z412 305 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
UBR5-207ENST00000520539 BZW2Q9Y6E2 419 aaKnown RBP17.05■□□□□ 0.32
UBR5-207ENST00000520539 DAB1O75553 588 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 BCAR3O75815 825 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
UBR5-207ENST00000520539 TEX9Q8N6V9 391 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 ATF3P18847 181 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 PLCD1P51178 756 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 CASC4Q6P4E1 433 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 PRR23D1E9PI22 279 aaPredicted RBP17.04■□□□□ 0.32
UBR5-207ENST00000520539 PRDM1O75626 825 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 PRR23D2P0DMB1 279 aaPredicted RBP17.04■□□□□ 0.32
UBR5-207ENST00000520539 TTC16Q8NEE8 873 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 TBC1D23Q9NUY8 699 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 RPS6KA1Q15418 735 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 CHGBP05060 677 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
UBR5-207ENST00000520539 GARSP41250 739 aaKnown RBP17.04■□□□□ 0.32
UBR5-207ENST00000520539 TBC1D9Q6ZT07 1266 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 AFMP43652 599 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 SYCE1LA8MT33 242 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 KARSQ15046 597 aaKnown RBP17.04■□□□□ 0.32
UBR5-207ENST00000520539 CNGA2Q16280 664 aa17.04■□□□□ 0.32
UBR5-207ENST00000520539 RANBP1P43487 201 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 STX1BP61266 288 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 TAF12Q16514 161 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 KIF2CQ99661 725 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 KRT2P35908 639 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 APOBRQ0VD83 1088 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 CDAN1Q8IWY9 1227 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 NXNQ6DKJ4 435 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 ZC3H18Q86VM9 953 aaKnown RBP17.03■□□□□ 0.32
UBR5-207ENST00000520539 RAPGEF1Q13905 1077 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 IFIT5Q13325 482 aaKnown RBP17.03■□□□□ 0.32
UBR5-207ENST00000520539 ESR2Q92731 530 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 FRMD3A2A2Y4 597 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 CCDC15Q0P6D6 951 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 RAB3GAP1Q15042 981 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 EXOC7Q9UPT5 735 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 WTAPQ15007 396 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 SLC26A6Q9BXS9 759 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 NDE1Q9NXR1 346 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
UBR5-207ENST00000520539 KRT7P08729 469 aa17.02■□□□□ 0.32
UBR5-207ENST00000520539 RTN1Q16799 776 aa17.02■□□□□ 0.32
UBR5-207ENST00000520539 CDKL2Q92772 493 aa17.02■□□□□ 0.32
UBR5-207ENST00000520539 TFIP11Q9UBB9 837 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms