RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 PBX4Q9BYU1 374 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 ZNF700Q9H0M5 742 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 CDH19Q9H159 772 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 PHAXQ9H814 394 aaKnown RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 INTS7Q9NVH2 962 aaKnown RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 BSDC1Q9NW68 430 aaPredicted RBP3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 SLC5A4Q9NY91 659 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 PNMA2Q9UL42 364 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 PCDHB10Q9UN67 800 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 PRR36Q9H6K5 1346 aa3.34□□□□□ -1.87
SCARNA3-201ENST00000517097 TRAV20A0A0B4J274 112 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 LOC102724428A0A0B4J2F2 783 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 CCDC189A1A4V9 331 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 DCDC2BA2VCK2 349 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 FAM83GA6ND36 823 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 FAM86C2PA6NEL3 165 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC22A31A6NKX4 558 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 AGRPO00253 132 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 IFRD1O00458 451 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 TNFRSF10CO14798 259 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 WDHD1O75717 1129 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 F11P03951 625 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 GSK3AP49840 483 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 NRLP54845 237 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 SIK1P57059 783 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 ATP11AP98196 1134 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 ITKQ08881 620 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 STRN3Q13033 797 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 PIN1Q13526 163 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 MLECQ14165 292 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 MAP7Q14244 749 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 MLC1Q15049 377 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 GNPTABQ3T906 1256 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 SV2CQ496J9 727 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 ZFYVE27Q5T4F4 411 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 YOD1Q5VVQ6 348 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 RNF219Q5W0B1 726 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC4A10Q6U841 1118 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 KSR2Q6VAB6 950 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 NLRC3Q7RTR2 1065 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 PDZD3Q86UT5 571 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 PASD1Q8IV76 773 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 TCEAL8Q8IYN2 117 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 AHI1Q8N157 1196 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 BHMTQ93088 406 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 ATG4CQ96DT6 458 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 IPO9Q96P70 1041 aaKnown RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 GAS2L1Q99501 681 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 POP1Q99575 1024 aaKnown RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC30A3Q99726 388 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 ARPC5LQ9BPX5 153 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 RTFDC1Q9BY42 306 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 CCDC8Q9H0W5 538 aaPredicted RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 EFCC1Q9HA90 598 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 ARHGEF4Q9NR80 690 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 GNL3LQ9NVN8 582 aaKnown RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 TERF2IPQ9NYB0 399 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 NOB1Q9ULX3 412 aaKnown RBP3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 DYRK1BQ9Y463 629 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 CORINQ9Y5Q5 1042 aa3.33□□□□□ -1.88
SCARNA3-201ENST00000517097 A0A1W2PQU0 124 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 E2F8A0AVK6 867 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC35F4A4IF30 521 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 ZBTB42B2RXF5 422 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 GFRA2O00451 464 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 GPR39O43194 453 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 PRPF3O43395 683 aaKnown RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 DNAJA2O60884 412 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 NPTXRO95502 500 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 CDC27P30260 824 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 PDE6BP35913 854 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 GPLD1P80108 840 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC7A5Q01650 507 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 MLLT1Q03111 559 aaPredicted RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 TNP2Q05952 138 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SPEM2Q0P670 501 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 LAMC2Q13753 1193 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 HSP90AA2PQ14568 343 aaPredicted RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 STAT4Q14765 748 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 ZRSR2Q15696 482 aaKnown RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 LONRF3Q496Y0 759 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 RNFT1Q5M7Z0 435 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 FAM102BQ5T8I3 360 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 MAP1SQ66K74 1059 aaPredicted RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 NXNQ6DKJ4 435 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 PKN3Q6P5Z2 889 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 FIGNL1Q6PIW4 674 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 HFE2Q6ZVN8 426 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 VN1R5Q7Z5H4 357 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 ZBTB46Q86UZ6 589 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SCUBE1Q8IWY4 988 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 PPM1KQ8N3J5 372 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 CCDC155Q8N6L0 562 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SVIPQ8NHG7 77 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 PNISRQ8TF01 805 aaKnown RBP3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 CHMP4CQ96CF2 233 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 TRERF1Q96PN7 1200 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 CAMKK2Q96RR4 588 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 SLC9A7Q96T83 725 aa3.32□□□□□ -1.88
SCARNA3-201ENST00000517097 YIPF4Q9BSR8 244 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms