RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 CALML4Q96GE6 196 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CDK5RAP3Q96JB5 506 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPP1R13BQ96KQ4 1090 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC42Q96M95 316 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TCEANC2Q96MN5 208 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ALS2CR12Q96Q35 445 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 USP28Q96RU2 1077 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CEP89Q96ST8 783 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NAP1L4Q99733 375 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NAPGQ99747 312 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TSG101Q99816 390 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 DBNDD2Q9BQY9 259 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SELENOOQ9BVL4 669 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CARD6Q9BX69 1037 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 MFRPQ9BY79 579 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRRC2Q9BYS8 371 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 AGXT2Q9BYV1 514 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CUEDC2Q9H467 287 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 HAUS4Q9H6D7 363 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 VIPAS39Q9H9C1 493 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 L2HGDHQ9H9P8 463 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 EFCC1Q9HA90 598 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAGEF1Q9HAY2 307 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CABP5Q9NP86 173 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRDM10Q9NQV6 1147 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 FANCLQ9NW38 375 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RAI14Q9P0K7 980 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RNF14Q9UBS8 474 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRMT112Q9UI30 125 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TUBE1Q9UJT0 475 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 TSKSQ9UJT2 592 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 DBNLQ9UJU6 430 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CDC23Q9UJX2 597 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZHX1Q9UKY1 873 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF215Q9UL58 517 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPP2R2CQ9Y2T4 447 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PCDHA5Q9Y5H7 936 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SRPRBQ9Y5M8 271 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CLIC4Q9Y696 253 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SAR1BQ9Y6B6 198 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLC4A4Q9Y6R1 1079 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RIMS1Q86UR5 1692 aaKnown RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 LMO7Q8WWI1 1683 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZMYM6O95789 1325 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PCDH11XQ9BZA7 1347 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 PCDH11YQ9BZA8 1340 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 STK36Q9NRP7 1315 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 RGPD1P0DJD0 1748 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 NALCNQ8IZF0 1738 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 CARMIL3Q8ND23 1372 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 MED23Q9ULK4 1368 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SCN11AQ9UI33 1791 aa2.33□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLIT1O75093 1534 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 FAM208AQ9UK61 1670 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 KDM3BQ7LBC6 1761 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAGEB6P1A0A0J9YX57 407 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GOLGA6L10A0A0M3HER8 536 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GOLGA6L7A0A1B0GV03 622 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC194A0A1B0GVG4 234 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ERICH4A6NGS2 130 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 MINDY4BA8MYZ0 360 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ERVV-1B6SEH8 477 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GOLGA8KD6RF30 607 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 H0YHG0 523 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GPAA1O43292 621 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRPF3O43395 683 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 KCNQ3O43525 872 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PPP1R12BO60237 982 aaPredicted RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 RANBP6O60518 1105 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 LARGE1O95461 756 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GNA14O95837 355 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 MMP1P03956 469 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 OATP04181 439 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 IGKV5-2P06315 115 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLFN14P0C7P3 912 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 IL2RBP14784 551 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRLRP16471 622 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CAPN2P17655 700 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRIM21P19474 475 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PTPREP23469 700 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 EEF1GP26641 437 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 CYP2C19P33261 490 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ACTN2P35609 894 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ADD1P35611 737 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ADD2P35612 726 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PRPHP41219 470 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 STAT6P42226 847 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 LMAN1P49257 510 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 FXR2P51116 673 aaKnown RBP eCLIP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 VAV2P52735 878 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 ADKP55263 362 aaKnown RBP2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 HAND2P61296 217 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 GSTO1P78417 241 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 FOXO4P98177 505 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 APBA1Q02410 837 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 UBXN1Q04323 297 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRMPQ12912 555 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 PSMD2Q13200 908 aa2.32□□□□□ -2.04
RNU1-40P-201ENST00000516816 SLC39A6Q13433 755 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms