RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.48□□□□□ -1.53
RNU4-49P-201ENST00000516080 C8AP07357 584 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 CDK8P49336 464 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 ST13P50502 369 aaKnown RBP5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 PSMD2Q13200 908 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 FZD5Q13467 585 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 MAP3K11Q16584 847 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 TSNAXIP1Q2TAA8 658 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 PRAMEF13Q5VWM6 474 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 HSPA12BQ96MM6 686 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 NOC4LQ9BVI4 516 aaKnown RBP5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 KRTAP9-9Q9BYP9 154 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 PARP2Q9UGN5 583 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 PCDHB5Q9Y5E4 795 aa5.47□□□□□ -1.53
RNU4-49P-201ENST00000516080 FARP2O94887 1054 aaPredicted RBP5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 PDIA4P13667 645 aaKnown RBP5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 KIR3DL1P43629 444 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 DAB2P98082 770 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 PDE4BQ07343 736 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 TAF1CQ15572 869 aaPredicted RBP5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 THAP5Q7Z6K1 395 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 NPAS4Q8IUM7 802 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 AEBP1Q8IUX7 1158 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 MRPL41Q8IXM3 137 aaKnown RBP5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 PRDM7Q9NQW5 492 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 SEMA3GQ9NS98 782 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 FAM53CQ9NYF3 392 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 CAPN6Q9Y6Q1 641 aa5.46□□□□□ -1.54
RNU4-49P-201ENST00000516080 PRR33A8MZF0 331 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 PGRP06401 933 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 ETV3P41162 512 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 AFMP43652 599 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 XPCQ01831 940 aaPredicted RBP5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 RPL6Q02878 288 aaKnown RBP5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 MEI1Q5TIA1 1274 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 CDKAL1Q5VV42 579 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 SLC6A19Q695T7 634 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 CCDC84Q86UT8 332 aaPredicted RBP5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 ZSWIM9Q86XI8 627 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 RIN3Q8TB24 985 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 CCDC120Q96HB5 630 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 CARS2Q9HA77 564 aaKnown RBP5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 ATP13A1Q9HD20 1204 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 RNF19AQ9NV58 838 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 CTNND2Q9UQB3 1225 aa5.45□□□□□ -1.54
RNU4-49P-201ENST00000516080 CBX7O95931 251 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 TFE3P19532 575 aaPredicted RBP5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 ITGAEP38570 1179 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 PKN1Q16512 942 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 KCNMB1Q16558 191 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 ZNF648Q5T619 568 aaPredicted RBP5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 TMC4Q7Z404 712 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 PIWIL2Q8TC59 973 aaKnown RBP5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 XAGE3Q8WTP9 111 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 TMEM87BQ96K49 555 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 TJP2Q9UDY2 1190 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 ADAM30Q9UKF2 790 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 ST14Q9Y5Y6 855 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 CNTNAP4Q9C0A0 1308 aa5.44□□□□□ -1.54
RNU4-49P-201ENST00000516080 USP31Q70CQ4 1352 aa5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 H3BS24 57 aa5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 DNAJC14Q6Y2X3 702 aaPredicted RBP5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 CDH24Q86UP0 819 aa5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 MCATQ8IVS2 390 aaKnown RBP5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 KSR1Q8IVT5 923 aa5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 PHC3Q8NDX5 983 aa5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 JARID2Q92833 1246 aaPredicted RBP5.43□□□□□ -1.54
RNU4-49P-201ENST00000516080 LRRC10BA6NIK2 292 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 GDNFP39905 211 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 JAG1P78504 1218 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 TMPRSS7Q7RTY8 843 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 UBE2FQ969M7 185 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 CRELD1Q96HD1 420 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 SLC38A3Q99624 504 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 TLR6Q9Y2C9 796 aa5.42□□□□□ -1.54
RNU4-49P-201ENST00000516080 BPNT1O95861 308 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 CTSHP09668 335 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 ERCC3P19447 782 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 LMNB2Q03252 620 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 TNK2Q07912 1038 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 FBXO33Q7Z6M2 555 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 KIRREL1Q96J84 757 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 FAM84AQ96KN4 292 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 DPH2Q9BQC3 489 aaPredicted RBP5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 MRS2Q9HD23 443 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 ZSWIM5Q9P217 1185 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 CEP131Q9UPN4 1083 aa5.41□□□□□ -1.54
RNU4-49P-201ENST00000516080 ZNF503-AS2A6NEH8 195 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 SORBS3O60504 671 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 CILPO75339 1184 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 GLI1P08151 1106 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 YARSP54577 528 aaKnown RBP5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 CAMK2GQ13555 558 aaPredicted RBP5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 PWP1Q13610 501 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 TMEM67Q5HYA8 995 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 RELL1Q8IUW5 271 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 BHLHE22Q8NFJ8 381 aaPredicted RBP5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 DNAJB8Q8NHS0 232 aa5.4□□□□□ -1.54
RNU4-49P-201ENST00000516080 ACSF2Q96CM8 615 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms