RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 ECHDC1Q9NTX5 307 aa23.56■■□□□ 1.36
CCHCR1-230ENST00000513222 ZBTB21Q9ULJ3 1066 aa23.56■■□□□ 1.36
CCHCR1-230ENST00000513222 PTCH2Q9Y6C5 1203 aa23.56■■□□□ 1.36
CCHCR1-230ENST00000513222 BRCA2P51587 3418 aa23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 BAZ2AQ9UIF9 1905 aaKnown RBP23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 SMARCA5O60264 1052 aaPredicted RBP23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 HOXA7P31268 230 aaPredicted RBP23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 PSMC4P43686 418 aa23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 PLCD1P51178 756 aa23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 TREML2Q5T2D2 321 aa23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 SRRDQ9UH36 339 aa23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 PNMA3Q9UL41 463 aa23.55■■□□□ 1.36
CCHCR1-230ENST00000513222 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.54■■□□□ 1.362e-6■■■□□ 15.9
CCHCR1-230ENST00000513222 DCP1AQ9NPI6 582 aaPredicted RBP23.54■■□□□ 1.36
CCHCR1-230ENST00000513222 MYH8P13535 1937 aa23.53■■□□□ 1.36
CCHCR1-230ENST00000513222 HOXD10P28358 340 aa23.53■■□□□ 1.36
CCHCR1-230ENST00000513222 HMGCS2P54868 508 aa23.53■■□□□ 1.36
CCHCR1-230ENST00000513222 PABPC4Q13310 644 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCHCR1-230ENST00000513222 NBPF11Q86T75 865 aa23.53■■□□□ 1.36
CCHCR1-230ENST00000513222 TRIM34Q9BYJ4 488 aa23.53■■□□□ 1.36
CCHCR1-230ENST00000513222 USP17L10C9JJH3 530 aa23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 OSBPP22059 807 aa23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 SHMT1P34896 483 aa23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 GCLCP48506 637 aaPredicted RBP23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 FAM110CQ1W6H9 321 aa23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 SHROOM1Q2M3G4 852 aaPredicted RBP23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 LCORLQ8N3X6 602 aa23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 ATP8A2Q9NTI2 1148 aa23.52■■□□□ 1.36
CCHCR1-230ENST00000513222 AAMPQ13685 434 aa23.51■■□□□ 1.35
CCHCR1-230ENST00000513222 SLC9C1Q4G0N8 1177 aa23.51■■□□□ 1.35
CCHCR1-230ENST00000513222 ZSCAN25Q6NSZ9 544 aa23.51■■□□□ 1.35
CCHCR1-230ENST00000513222 C12orf42Q96LP6 360 aa23.51■■□□□ 1.35
CCHCR1-230ENST00000513222 GDF11O95390 407 aa23.5■■□□□ 1.35
CCHCR1-230ENST00000513222 FCGRTP55899 365 aa23.5■■□□□ 1.35
CCHCR1-230ENST00000513222 MTMR2Q13614 643 aa23.5■■□□□ 1.35
CCHCR1-230ENST00000513222 SMCR8Q8TEV9 937 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-230ENST00000513222 ASCC2Q9H1I8 757 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-230ENST00000513222 MKI67P46013 3256 aaKnown RBP23.49■■□□□ 1.35
CCHCR1-230ENST00000513222 GH2P01242 217 aa23.49■■□□□ 1.35
CCHCR1-230ENST00000513222 CERKLQ49MI3 558 aaPredicted RBP23.49■■□□□ 1.35
CCHCR1-230ENST00000513222 KBTBD3Q8NAB2 608 aa23.49■■□□□ 1.35
CCHCR1-230ENST00000513222 MORF4L1Q9UBU8 362 aa23.49■■□□□ 1.35
CCHCR1-230ENST00000513222 TTC41PQ6P2S7 1318 aa23.49■■□□□ 1.35
CCHCR1-230ENST00000513222 POTEFA5A3E0 1075 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 FMNL1O95466 1100 aaPredicted RBP23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 IRF5Q13568 498 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 SLFNL1Q499Z3 407 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 SDR42E1Q8WUS8 393 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 GPATCH3Q96I76 525 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 ARMT1Q9H993 441 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 EMILIN3Q9NT22 766 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 MCM9Q9NXL9 1143 aa23.48■■□□□ 1.35
CCHCR1-230ENST00000513222 GUCY1A2P33402 732 aa23.47■■□□□ 1.35
CCHCR1-230ENST00000513222 HDAC1Q13547 482 aaPredicted RBP23.47■■□□□ 1.35
CCHCR1-230ENST00000513222 KIAA1683Q9H0B3 1180 aa23.47■■□□□ 1.35
CCHCR1-230ENST00000513222 TMOD4Q9NZQ9 345 aa23.47■■□□□ 1.35
CCHCR1-230ENST00000513222 PLXNB2O15031 1838 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 MBD4O95243 580 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 CHGBP05060 677 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 POLR3DP05423 398 aaPredicted RBP23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 ABCB5Q2M3G0 1257 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 USP17L2Q6R6M4 530 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 MYPNQ86TC9 1320 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 ANKRD13CQ8N6S4 541 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 SALL3Q9BXA9 1300 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 PUS7LQ9H0K6 701 aaKnown RBP23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 SWAP70Q9UH65 585 aa23.46■■□□□ 1.35
CCHCR1-230ENST00000513222 SLC4A8Q2Y0W8 1093 aa23.45■■□□□ 1.34
CCHCR1-230ENST00000513222 C12orf60Q5U649 245 aa23.45■■□□□ 1.34
CCHCR1-230ENST00000513222 PI4K2BQ8TCG2 481 aa23.45■■□□□ 1.34
CCHCR1-230ENST00000513222 PXYLP1Q8TE99 480 aa23.45■■□□□ 1.34
CCHCR1-230ENST00000513222 CRBNQ96SW2 442 aa23.45■■□□□ 1.34
CCHCR1-230ENST00000513222 RLFQ13129 1914 aa23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 PRKAB2O43741 272 aa23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 ZFYP08048 801 aaPredicted RBP23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 GRK4P32298 578 aa23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 EVX2Q03828 476 aa23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 PRKCZQ05513 592 aa23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 GIMAP6Q6P9H5 292 aa23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 STRBPQ96SI9 672 aaKnown RBP23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 CABP5Q9NP86 173 aa23.44■■□□□ 1.34
CCHCR1-230ENST00000513222 USP14P54578 494 aa23.43■■□□□ 1.34
CCHCR1-230ENST00000513222 SH3TC2Q8TF17 1288 aa23.43■■□□□ 1.34
CCHCR1-230ENST00000513222 GTF3C2Q8WUA4 911 aaPredicted RBP23.43■■□□□ 1.34
CCHCR1-230ENST00000513222 P2RX7Q99572 595 aaKnown RBP23.43■■□□□ 1.34
CCHCR1-230ENST00000513222 GABRQQ9UN88 632 aa23.43■■□□□ 1.34
CCHCR1-230ENST00000513222 GREB1LQ9C091 1923 aaPredicted RBP23.43■■□□□ 1.34
CCHCR1-230ENST00000513222 HERVK_113P62684 666 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 SBK1Q52WX2 424 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 POTEEQ6S8J3 1075 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 LBX2Q6XYB7 198 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 SLAIN1Q8ND83 568 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 RAET1EQ8TD07 263 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 APPBP2Q92624 585 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 GCC1Q96CN9 775 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 TMEM106CQ9BVX2 250 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 BCL11AQ9H165 835 aa23.42■■□□□ 1.34
CCHCR1-230ENST00000513222 USP17L12C9JPN9 530 aa23.41■■□□□ 1.34
CCHCR1-230ENST00000513222 USP17L21D6R901 530 aa23.41■■□□□ 1.34
CCHCR1-230ENST00000513222 ERC2O15083 957 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms