RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 KIF22Q14807 665 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 ARHGEF6Q15052 776 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 SLC9C2Q5TAH2 1124 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 CRACR2BQ8N4Y2 399 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-203ENST00000510217 PROCA1Q8NCQ7 364 aaPredicted RBP12.48□□□□□ -0.41
PFDN1-203ENST00000510217 HAUS7Q99871 368 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 TRIM34Q9BYJ4 488 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 PAG1Q9NWQ8 432 aa12.48□□□□□ -0.41
PFDN1-203ENST00000510217 ASNSP08243 561 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 HMGCS2P54868 508 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 SH3D19Q5HYK7 790 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 FOXP4Q8IVH2 680 aaPredicted RBP12.47□□□□□ -0.41
PFDN1-203ENST00000510217 LCORLQ8N3X6 602 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 ZNF333Q96JL9 665 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 EHD4Q9H223 541 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 DCTPP1Q9H773 170 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 ZBTB21Q9ULJ3 1066 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 MYH8P13535 1937 aa12.47□□□□□ -0.41
PFDN1-203ENST00000510217 BAZ2AQ9UIF9 1905 aaKnown RBP12.47□□□□□ -0.41
PFDN1-203ENST00000510217 POTEFA5A3E0 1075 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 GNRH1P01148 92 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 CHGBP05060 677 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 OSBPP22059 807 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 ADD2P35612 726 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 PSMC4P43686 418 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 MTMR2Q13614 643 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 WDR18Q9BV38 432 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 SERPINB13Q9UIV8 391 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 PCDHB15Q9Y5E8 787 aa12.46□□□□□ -0.41
PFDN1-203ENST00000510217 PLCD1P51178 756 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 PRMT2P55345 433 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 EVX2Q03828 476 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 TATDN1Q6P1N9 297 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 SMCR8Q8TEV9 937 aaPredicted RBP12.45□□□□□ -0.42
PFDN1-203ENST00000510217 SDR42E1Q8WUS8 393 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 CRNKL1Q9BZJ0 848 aaKnown RBP12.45□□□□□ -0.42
PFDN1-203ENST00000510217 GINM1Q9NU53 330 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 SRRDQ9UH36 339 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 PNMA3Q9UL41 463 aa12.45□□□□□ -0.42
PFDN1-203ENST00000510217 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 MBD4O95243 580 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 FMNL1O95466 1100 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-203ENST00000510217 GH2P01242 217 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 SHMT1P34896 483 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 FCGRTP55899 365 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 BACE1P56817 501 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 PRKCZQ05513 592 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 GABPAQ06546 454 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 TSHZ3Q63HK5 1081 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 TTC6Q86TZ1 520 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 ANKRD13CQ8N6S4 541 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 SH3TC2Q8TF17 1288 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 ARMT1Q9H993 441 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 DCP1AQ9NPI6 582 aaPredicted RBP12.44□□□□□ -0.42
PFDN1-203ENST00000510217 ECHDC1Q9NTX5 307 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
PFDN1-203ENST00000510217 USP17L10C9JJH3 530 aa12.43□□□□□ -0.42
PFDN1-203ENST00000510217 FAM110CQ1W6H9 321 aa12.43□□□□□ -0.42
PFDN1-203ENST00000510217 B4GALNT3Q6L9W6 998 aa12.43□□□□□ -0.42
PFDN1-203ENST00000510217 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
PFDN1-203ENST00000510217 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
PFDN1-203ENST00000510217 ASCC2Q9H1I8 757 aaPredicted RBP12.43□□□□□ -0.42
PFDN1-203ENST00000510217 MCM9Q9NXL9 1143 aa12.43□□□□□ -0.42
PFDN1-203ENST00000510217 GABRQQ9UN88 632 aa12.43□□□□□ -0.42
PFDN1-203ENST00000510217 C19orf81C9J6K1 198 aa12.42□□□□□ -0.42
PFDN1-203ENST00000510217 PRKAB2O43741 272 aa12.42□□□□□ -0.42
PFDN1-203ENST00000510217 POLR3DP05423 398 aaPredicted RBP12.42□□□□□ -0.42
PFDN1-203ENST00000510217 CYP2D6P10635 497 aa12.42□□□□□ -0.42
PFDN1-203ENST00000510217 PABPC4Q13310 644 aaKnown RBP eCLIP12.42□□□□□ -0.42
PFDN1-203ENST00000510217 UBE3CQ15386 1083 aa12.42□□□□□ -0.42
PFDN1-203ENST00000510217 CERKLQ49MI3 558 aaPredicted RBP12.42□□□□□ -0.42
PFDN1-203ENST00000510217 NBPF11Q86T75 865 aa12.42□□□□□ -0.42
PFDN1-203ENST00000510217 TMOD4Q9NZQ9 345 aa12.42□□□□□ -0.42
PFDN1-203ENST00000510217 MKI67P46013 3256 aaKnown RBP12.42□□□□□ -0.42
PFDN1-203ENST00000510217 A0A0G2JMZ2 1700 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 HOXD10P28358 340 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 HOXA7P31268 230 aaPredicted RBP12.41□□□□□ -0.42
PFDN1-203ENST00000510217 GUCY1A2P33402 732 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 ABCB5Q2M3G0 1257 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 SLC44A5Q8NCS7 719 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 RAET1EQ8TD07 263 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 GPATCH3Q96I76 525 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 C12orf42Q96LP6 360 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 PUS7LQ9H0K6 701 aaKnown RBP12.41□□□□□ -0.42
PFDN1-203ENST00000510217 EMILIN3Q9NT22 766 aa12.41□□□□□ -0.42
PFDN1-203ENST00000510217 GREB1LQ9C091 1923 aaPredicted RBP12.41□□□□□ -0.42
PFDN1-203ENST00000510217 DOCK3Q8IZD9 2030 aa12.4□□□□□ -0.42
PFDN1-203ENST00000510217 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
PFDN1-203ENST00000510217 TNPO2O14787 897 aaKnown RBP12.4□□□□□ -0.42
PFDN1-203ENST00000510217 MYCP01106 439 aaPredicted RBP12.4□□□□□ -0.42
PFDN1-203ENST00000510217 EN2P19622 333 aaPredicted RBP12.4□□□□□ -0.42
PFDN1-203ENST00000510217 GRK4P32298 578 aa12.4□□□□□ -0.42
PFDN1-203ENST00000510217 GCLCP48506 637 aaPredicted RBP12.4□□□□□ -0.42
PFDN1-203ENST00000510217 IRX3P78415 501 aaPredicted RBP12.4□□□□□ -0.42
PFDN1-203ENST00000510217 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
PFDN1-203ENST00000510217 ZYXQ15942 572 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms