RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 EFCC1Q9HA90 598 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 CABP5Q9NP86 173 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 SWAP70Q9UH65 585 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 ZBTB21Q9ULJ3 1066 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 TRIM17Q9Y577 477 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 PTPRFP10586 1907 aa25.65■■□□□ 1.7
UBE2D3-229ENST00000510129 CCDC85CA6NKD9 419 aa25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 GNAT2P19087 354 aa25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 RRP1BQ14684 758 aaKnown RBP25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 CERKLQ49MI3 558 aaPredicted RBP25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 SH3D19Q5HYK7 790 aa25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 TICAM2Q86XR7 235 aa25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 CD99L2Q8TCZ2 262 aa25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 STAP2Q9UGK3 403 aa25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 SLC4A4Q9Y6R1 1079 aa25.64■■□□□ 1.7
UBE2D3-229ENST00000510129 SALL3Q9BXA9 1300 aa25.63■■□□□ 1.69
UBE2D3-229ENST00000510129 PLCD1P51178 756 aa25.63■■□□□ 1.69
UBE2D3-229ENST00000510129 SLC4A8Q2Y0W8 1093 aa25.63■■□□□ 1.69
UBE2D3-229ENST00000510129 C17orf99Q6UX52 265 aa25.63■■□□□ 1.69
UBE2D3-229ENST00000510129 OTOP1Q7RTM1 612 aa25.63■■□□□ 1.69
UBE2D3-229ENST00000510129 PUS7LQ9H0K6 701 aaKnown RBP25.63■■□□□ 1.69
UBE2D3-229ENST00000510129 TMOD4Q9NZQ9 345 aa25.63■■□□□ 1.69
UBE2D3-229ENST00000510129 GDF11O95390 407 aa25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 BACE1P56817 501 aa25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 GABPAQ06546 454 aa25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 ABCB5Q2M3G0 1257 aa25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 GIMAP6Q6P9H5 292 aa25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 FSD1Q9BTV5 496 aa25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 ADGRA2Q96PE1 1338 aa25.62■■□□□ 1.69
UBE2D3-229ENST00000510129 USP17L10C9JJH3 530 aa25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 LACTBP83111 547 aaPredicted RBP25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 CCDC84Q86UT8 332 aaPredicted RBP25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 OTUD7AQ8TE49 926 aaPredicted RBP25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 SMCR8Q8TEV9 937 aaPredicted RBP25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 STRBPQ96SI9 672 aaKnown RBP25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 ARPP21Q9UBL0 812 aaPredicted RBP25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 LOC285556D6RIA3 1793 aa25.61■■□□□ 1.69
UBE2D3-229ENST00000510129 GH2P01242 217 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 OSBPP22059 807 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 SHMT1P34896 483 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 PDE1AP54750 535 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 HMGCS2P54868 508 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 PRMT2P55345 433 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 EVI5LQ96CN4 794 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 HPS5Q9UPZ3 1129 aa25.6■■□□□ 1.69
UBE2D3-229ENST00000510129 PRKAB2O43741 272 aa25.59■■□□□ 1.69
UBE2D3-229ENST00000510129 MTMR2Q13614 643 aa25.59■■□□□ 1.69
UBE2D3-229ENST00000510129 SLFNL1Q499Z3 407 aa25.59■■□□□ 1.69
UBE2D3-229ENST00000510129 C12orf60Q5U649 245 aa25.58■■□□□ 1.69
UBE2D3-229ENST00000510129 CHD1LQ86WJ1 897 aa25.58■■□□□ 1.69
UBE2D3-229ENST00000510129 CPA4Q9UI42 421 aa25.58■■□□□ 1.69
UBE2D3-229ENST00000510129 PTPN22Q9Y2R2 807 aa25.58■■□□□ 1.69
UBE2D3-229ENST00000510129 USP17L12C9JPN9 530 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 USP17L21D6R901 530 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 CYP2C8P10632 490 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 HOXD10P28358 340 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 GCLCP48506 637 aaPredicted RBP25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 USP14P54578 494 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 NUCB1Q02818 461 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 RAB3GAP1Q15042 981 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 USP17L2Q6R6M4 530 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 OSBP2Q969R2 916 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 CCDC17Q96LX7 622 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 FEZ1Q99689 392 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 LNPKQ9C0E8 428 aa25.57■■□□□ 1.68
UBE2D3-229ENST00000510129 CHGBP05060 677 aa25.56■■□□□ 1.68
UBE2D3-229ENST00000510129 BCRP11274 1271 aa25.56■■□□□ 1.68
UBE2D3-229ENST00000510129 JAG1P78504 1218 aa25.56■■□□□ 1.68
UBE2D3-229ENST00000510129 SBK1Q52WX2 424 aa25.56■■□□□ 1.68
UBE2D3-229ENST00000510129 NACAP1Q9BZK3 213 aa25.56■■□□□ 1.68
UBE2D3-229ENST00000510129 GPAA1O43292 621 aa25.55■■□□□ 1.68
UBE2D3-229ENST00000510129 IGHDP01880 384 aa25.55■■□□□ 1.68
UBE2D3-229ENST00000510129 HOXA7P31268 230 aaPredicted RBP25.55■■□□□ 1.68
UBE2D3-229ENST00000510129 TREML2Q5T2D2 321 aa25.55■■□□□ 1.68
UBE2D3-229ENST00000510129 B4GALNT3Q6L9W6 998 aa25.55■■□□□ 1.68
UBE2D3-229ENST00000510129 TMEM179Q6ZVK1 233 aa25.55■■□□□ 1.68
UBE2D3-229ENST00000510129 FCGRTP55899 365 aa25.54■■□□□ 1.68
UBE2D3-229ENST00000510129 IRX3P78415 501 aaPredicted RBP25.54■■□□□ 1.68
UBE2D3-229ENST00000510129 CTR9Q6PD62 1173 aa25.54■■□□□ 1.68
UBE2D3-229ENST00000510129 GTF3C2Q8WUA4 911 aaPredicted RBP25.54■■□□□ 1.68
UBE2D3-229ENST00000510129 C12orf42Q96LP6 360 aa25.54■■□□□ 1.68
UBE2D3-229ENST00000510129 KIAA1683Q9H0B3 1180 aa25.54■■□□□ 1.68
UBE2D3-229ENST00000510129 ZNF287Q9HBT7 754 aa25.54■■□□□ 1.68
UBE2D3-229ENST00000510129 BAZ2AQ9UIF9 1905 aaKnown RBP25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 GSG1L2A8MUP6 293 aa25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 PATL2C9JE40 543 aaKnown RBP25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 MPHOSPH10O00566 681 aaKnown RBP25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 CYP2D6P10635 497 aa25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 PSMC4P43686 418 aa25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 ZMYM1Q5SVZ6 1142 aa25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 C16orf86Q6ZW13 317 aa25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 OSBPL3Q9H4L5 887 aa25.53■■□□□ 1.68
UBE2D3-229ENST00000510129 APPP05067 770 aa25.52■■□□□ 1.68
UBE2D3-229ENST00000510129 FAM110CQ1W6H9 321 aa25.52■■□□□ 1.68
UBE2D3-229ENST00000510129 ASCC2Q9H1I8 757 aaPredicted RBP25.52■■□□□ 1.68
UBE2D3-229ENST00000510129 SH2D4AQ9H788 454 aa25.52■■□□□ 1.68
UBE2D3-229ENST00000510129 MYH8P13535 1937 aa25.52■■□□□ 1.68
UBE2D3-229ENST00000510129 FMNL1O95466 1100 aaPredicted RBP25.51■■□□□ 1.67
UBE2D3-229ENST00000510129 TDO2P48775 406 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms