RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 PDE6AP16499 860 aa19.72■□□□□ 0.75
LMNA-222ENST00000508500 FCGRTP55899 365 aa19.72■□□□□ 0.75
LMNA-222ENST00000508500 EVX2Q03828 476 aa19.72■□□□□ 0.75
LMNA-222ENST00000508500 CRACR2BQ8N4Y2 399 aaPredicted RBP19.72■□□□□ 0.75
LMNA-222ENST00000508500 BCL11AQ9H165 835 aa19.72■□□□□ 0.75
LMNA-222ENST00000508500 ZBTB21Q9ULJ3 1066 aa19.72■□□□□ 0.75
LMNA-222ENST00000508500 IFIT2P09913 472 aaKnown RBP19.71■□□□□ 0.75
LMNA-222ENST00000508500 HOXD10P28358 340 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 USP5P45974 858 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 BACE1P56817 501 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 MTMR2Q13614 643 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 SLFNL1Q499Z3 407 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 SLC9C2Q5TAH2 1124 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 TATDN1Q6P1N9 297 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 ANKRD13CQ8N6S4 541 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 SMCR8Q8TEV9 937 aaPredicted RBP19.71■□□□□ 0.75
LMNA-222ENST00000508500 DNAJC2Q99543 621 aaKnown RBP19.71■□□□□ 0.75
LMNA-222ENST00000508500 ASCC2Q9H1I8 757 aaPredicted RBP19.71■□□□□ 0.75
LMNA-222ENST00000508500 AS3MTQ9HBK9 375 aa19.71■□□□□ 0.75
LMNA-222ENST00000508500 HLA-DOAP06340 250 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 GRK4P32298 578 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 FXR1P51114 621 aaKnown RBP eCLIP19.7■□□□□ 0.74
LMNA-222ENST00000508500 PLCD1P51178 756 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 TTF1Q15361 905 aaPredicted RBP19.7■□□□□ 0.74
LMNA-222ENST00000508500 TMED8Q6PL24 325 aaPredicted RBP19.7■□□□□ 0.74
LMNA-222ENST00000508500 UBE2Q1Q7Z7E8 422 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 CERS3Q8IU89 383 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 RAET1EQ8TD07 263 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 BOLA2Q9H3K6 86 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 ZNF532Q9HCE3 1301 aa19.7■□□□□ 0.74
LMNA-222ENST00000508500 MAGEB6P1A0A0J9YX57 407 aa19.69■□□□□ 0.74
LMNA-222ENST00000508500 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
LMNA-222ENST00000508500 CHGBP05060 677 aa19.69■□□□□ 0.74
LMNA-222ENST00000508500 FAM110CQ1W6H9 321 aa19.69■□□□□ 0.74
LMNA-222ENST00000508500 EHD4Q9H223 541 aa19.69■□□□□ 0.74
LMNA-222ENST00000508500 CHMP4BQ9H444 224 aaKnown RBP19.69■□□□□ 0.74
LMNA-222ENST00000508500 GINM1Q9NU53 330 aa19.69■□□□□ 0.74
LMNA-222ENST00000508500 PNMA3Q9UL41 463 aa19.69■□□□□ 0.74
LMNA-222ENST00000508500 PEX10O60683 326 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 GH2P01242 217 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 ATP5JP18859 108 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 FLT3LGP49771 235 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 LCORLQ8N3X6 602 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 TRIM34Q9BYJ4 488 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 EMILIN3Q9NT22 766 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 SERPINB13Q9UIV8 391 aa19.68■□□□□ 0.74
LMNA-222ENST00000508500 USP17L10C9JJH3 530 aa19.67■□□□□ 0.74
LMNA-222ENST00000508500 HOXA7P31268 230 aaPredicted RBP19.67■□□□□ 0.74
LMNA-222ENST00000508500 SHMT1P34896 483 aa19.67■□□□□ 0.74
LMNA-222ENST00000508500 POTEEQ6S8J3 1075 aa19.67■□□□□ 0.74
LMNA-222ENST00000508500 P2RX7Q99572 595 aaKnown RBP19.67■□□□□ 0.74
LMNA-222ENST00000508500 PAG1Q9NWQ8 432 aa19.67■□□□□ 0.74
LMNA-222ENST00000508500 RLFQ13129 1914 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 RANBP2P49792 3224 aaKnown RBP19.66■□□□□ 0.74
LMNA-222ENST00000508500 C19orf81C9J6K1 198 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 TNPO2O14787 897 aaKnown RBP19.66■□□□□ 0.74
LMNA-222ENST00000508500 ADD2P35612 726 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 GCLCP48506 637 aaPredicted RBP19.66■□□□□ 0.74
LMNA-222ENST00000508500 GABPAQ06546 454 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 TTC6Q86TZ1 520 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 SDR42E1Q8WUS8 393 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 HAUS7Q99871 368 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 LRRCC1Q9C099 1032 aa19.66■□□□□ 0.74
LMNA-222ENST00000508500 COLQQ9Y215 455 aaPredicted RBP19.66■□□□□ 0.74
LMNA-222ENST00000508500 TRIOBPQ9H2D6 2365 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 PRKAB2O43741 272 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 ADCY3O60266 1144 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 CENPBP07199 599 aaPredicted RBP19.65■□□□□ 0.74
LMNA-222ENST00000508500 CCL5P13501 91 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 ELNP15502 786 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 GUCY1A2P33402 732 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 PABPC4Q13310 644 aaKnown RBP eCLIP19.65■□□□□ 0.745e-12■□□□□ 8.9
LMNA-222ENST00000508500 IRF5Q13568 498 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 ARMT1Q9H993 441 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 TXNRD2Q9NNW7 524 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 DCP1AQ9NPI6 582 aaPredicted RBP19.65■□□□□ 0.74
LMNA-222ENST00000508500 MORF4L1Q9UBU8 362 aa19.65■□□□□ 0.74
LMNA-222ENST00000508500 ALPK3Q96L96 1907 aa19.64■□□□□ 0.74
LMNA-222ENST00000508500 SZT2Q5T011 3432 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 SMIM22K7EJ46 135 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 CYP2D6P10635 497 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 SLAIN1Q8ND83 568 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 CRNKL1Q9BZJ0 848 aaKnown RBP19.64■□□□□ 0.73
LMNA-222ENST00000508500 DCTPP1Q9H773 170 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 TMOD4Q9NZQ9 345 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 GJD2Q9UKL4 321 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 PARP14Q460N5 1801 aa19.64■□□□□ 0.73
LMNA-222ENST00000508500 H0YGN5 161 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 GJA8P48165 433 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 HERVK_113P62684 666 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 CERKLQ49MI3 558 aaPredicted RBP19.63■□□□□ 0.73
LMNA-222ENST00000508500 ACER1Q8TDN7 264 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 PXYLP1Q8TE99 480 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 UNC93B1Q9H1C4 597 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 MCM9Q9NXL9 1143 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 RBPJLQ9UBG7 517 aa19.63■□□□□ 0.73
LMNA-222ENST00000508500 POLR3DP05423 398 aaPredicted RBP19.62■□□□□ 0.73
LMNA-222ENST00000508500 GJB1P08034 283 aa19.62■□□□□ 0.73
LMNA-222ENST00000508500 IRX3P78415 501 aaPredicted RBP19.62■□□□□ 0.73
LMNA-222ENST00000508500 ABCB5Q2M3G0 1257 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms