RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 MX1P20591 662 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 PLCD1P51178 756 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 LACTBP83111 547 aaPredicted RBP18.76■□□□□ 0.59
CLDND1-211ENST00000506575 LRRFIP1Q32MZ4 808 aaKnown RBP18.76■□□□□ 0.59
CLDND1-211ENST00000506575 TATDN1Q6P1N9 297 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 AMOTL1Q8IY63 956 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 WDR18Q9BV38 432 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 RWDD1Q9H446 243 aaPredicted RBP18.76■□□□□ 0.59
CLDND1-211ENST00000506575 ATP8A2Q9NTI2 1148 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 PNMA3Q9UL41 463 aa18.76■□□□□ 0.59
CLDND1-211ENST00000506575 SUPT16HQ9Y5B9 1047 aaKnown RBP18.76■□□□□ 0.59
CLDND1-211ENST00000506575 BAZ2AQ9UIF9 1905 aaKnown RBP18.75■□□□□ 0.59
CLDND1-211ENST00000506575 PRKAB2O43741 272 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 CHGBP05060 677 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 JAG1P78504 1218 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 PABPC4Q13310 644 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLDND1-211ENST00000506575 CERKLQ49MI3 558 aaPredicted RBP18.75■□□□□ 0.59
CLDND1-211ENST00000506575 EXOC6Q8TAG9 804 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 OTUD7AQ8TE49 926 aaPredicted RBP18.75■□□□□ 0.59
CLDND1-211ENST00000506575 SMCR8Q8TEV9 937 aaPredicted RBP18.75■□□□□ 0.59
CLDND1-211ENST00000506575 CABP5Q9NP86 173 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 PTPN22Q9Y2R2 807 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 SLC4A4Q9Y6R1 1079 aa18.75■□□□□ 0.59
CLDND1-211ENST00000506575 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
CLDND1-211ENST00000506575 GH2P01242 217 aa18.74■□□□□ 0.59
CLDND1-211ENST00000506575 ZFYP08048 801 aaPredicted RBP18.74■□□□□ 0.59
CLDND1-211ENST00000506575 BACE1P56817 501 aa18.74■□□□□ 0.59
CLDND1-211ENST00000506575 MTMR2Q13614 643 aa18.74■□□□□ 0.59
CLDND1-211ENST00000506575 SHROOM1Q2M3G4 852 aaPredicted RBP18.74■□□□□ 0.59
CLDND1-211ENST00000506575 TREML2Q5T2D2 321 aa18.74■□□□□ 0.59
CLDND1-211ENST00000506575 PUS7LQ9H0K6 701 aaKnown RBP18.74■□□□□ 0.59
CLDND1-211ENST00000506575 MYH8P13535 1937 aa18.74■□□□□ 0.59
CLDND1-211ENST00000506575 USP17L10C9JJH3 530 aa18.73■□□□□ 0.59
CLDND1-211ENST00000506575 RNF113AO15541 343 aaKnown RBP18.73■□□□□ 0.59
CLDND1-211ENST00000506575 ECM2O94769 699 aaPredicted RBP18.73■□□□□ 0.59
CLDND1-211ENST00000506575 GNRH1P01148 92 aa18.73■□□□□ 0.59
CLDND1-211ENST00000506575 ABCB5Q2M3G0 1257 aa18.73■□□□□ 0.59
CLDND1-211ENST00000506575 SH3D19Q5HYK7 790 aa18.73■□□□□ 0.59
CLDND1-211ENST00000506575 PI4K2BQ8TCG2 481 aa18.73■□□□□ 0.59
CLDND1-211ENST00000506575 ARHGAP39Q9C0H5 1083 aa18.73■□□□□ 0.59
CLDND1-211ENST00000506575 ZSWIM8A7E2V4 1837 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 C19orf81C9J6K1 198 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 OSBPP22059 807 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 SHMT1P34896 483 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 CAP1Q01518 475 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 RAB3GAP1Q15042 981 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 APPBP2Q92624 585 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 FSD1Q9BTV5 496 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 TAOK2Q9UL54 1235 aa18.72■□□□□ 0.59
CLDND1-211ENST00000506575 MPHOSPH10O00566 681 aaKnown RBP18.71■□□□□ 0.59
CLDND1-211ENST00000506575 FMNL1O95466 1100 aaPredicted RBP18.71■□□□□ 0.59
CLDND1-211ENST00000506575 CYP2D6P10635 497 aa18.71■□□□□ 0.59
CLDND1-211ENST00000506575 BCRP11274 1271 aa18.71■□□□□ 0.59
CLDND1-211ENST00000506575 PSMC4P43686 418 aa18.71■□□□□ 0.59
CLDND1-211ENST00000506575 SOX10P56693 466 aa18.71■□□□□ 0.59
CLDND1-211ENST00000506575 GABPAQ06546 454 aa18.71■□□□□ 0.59
CLDND1-211ENST00000506575 FEZ1Q99689 392 aa18.71■□□□□ 0.59
CLDND1-211ENST00000506575 SWAP70Q9UH65 585 aa18.71■□□□□ 0.59
CLDND1-211ENST00000506575 HOXD10P28358 340 aa18.7■□□□□ 0.58
CLDND1-211ENST00000506575 PRMT2P55345 433 aa18.7■□□□□ 0.58
CLDND1-211ENST00000506575 OSBP2Q969R2 916 aa18.7■□□□□ 0.58
CLDND1-211ENST00000506575 STRBPQ96SI9 672 aaKnown RBP18.7■□□□□ 0.58
CLDND1-211ENST00000506575 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
CLDND1-211ENST00000506575 MGAMO43451 1857 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 HTTP42858 3142 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 USP17L12C9JPN9 530 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 USP17L21D6R901 530 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 FCGRTP55899 365 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 IRX3P78415 501 aaPredicted RBP18.69■□□□□ 0.58
CLDND1-211ENST00000506575 EVX2Q03828 476 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 C12orf60Q5U649 245 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 USP17L2Q6R6M4 530 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 DYNLL2Q96FJ2 89 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 TRIM47Q96LD4 638 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 ASCC2Q9H1I8 757 aaPredicted RBP18.69■□□□□ 0.58
CLDND1-211ENST00000506575 PTCH2Q9Y6C5 1203 aa18.69■□□□□ 0.58
CLDND1-211ENST00000506575 GNAT2P19087 354 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 GCLCP48506 637 aaPredicted RBP18.68■□□□□ 0.58
CLDND1-211ENST00000506575 USP14P54578 494 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 ZYXQ15942 572 aaKnown RBP18.68■□□□□ 0.58
CLDND1-211ENST00000506575 SLC9C1Q4G0N8 1177 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 B4GALNT3Q6L9W6 998 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 NBPF11Q86T75 865 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 SMC5Q8IY18 1101 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 LNPKQ9C0E8 428 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 ARPP21Q9UBL0 812 aaPredicted RBP18.68■□□□□ 0.58
CLDND1-211ENST00000506575 STAP2Q9UGK3 403 aa18.68■□□□□ 0.58
CLDND1-211ENST00000506575 CYP2D7A0A087X1C5 515 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 GPAA1O43292 621 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 CTGFP29279 349 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 HOXA7P31268 230 aaPredicted RBP18.67■□□□□ 0.58
CLDND1-211ENST00000506575 RGS19P49795 217 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 PDE1AP54750 535 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 MLLT1Q03111 559 aaPredicted RBP18.67■□□□□ 0.58
CLDND1-211ENST00000506575 SEPT2Q15019 361 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 CTR9Q6PD62 1173 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 ANKRD13CQ8N6S4 541 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 SLC44A5Q8NCS7 719 aa18.67■□□□□ 0.58
CLDND1-211ENST00000506575 SRRDQ9UH36 339 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms