RNA–Protein interactions for RNA: ENST00000506494.1

AP001960.1-201, humanhuman

BASIC

Gene AP001960.1, Length 658 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001960.1-201ENST00000506494 ZNF587Q96SQ5 575 aaPredicted RBP8.64□□□□□ -1.03
AP001960.1-201ENST00000506494 ZNF214Q9UL59 606 aaPredicted RBP8.64□□□□□ -1.03
AP001960.1-201ENST00000506494 HIF3AQ9Y2N7 669 aa8.64□□□□□ -1.03
AP001960.1-201ENST00000506494 LOC100289279A0A1B0GTE1 492 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 AOC2O75106 756 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 VIL1P09327 827 aaKnown RBP8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 EPXP11678 715 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 CCNFP41002 786 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 TREML4Q6UXN2 200 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 KRT26Q7Z3Y9 468 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 DCAF11Q8TEB1 546 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 KLHL6Q8WZ60 621 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 ACSF2Q96CM8 615 aaPredicted RBP8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 MFSD3Q96ES6 412 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 CDC6Q99741 560 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 WDR18Q9BV38 432 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 CHMP4AQ9BY43 222 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 IRF2BPLQ9H1B7 796 aa8.63□□□□□ -1.03
AP001960.1-201ENST00000506494 FANCGO15287 622 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 ZNF143P52747 638 aaPredicted RBP8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 ERVK-24P63145 666 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 ID3Q02535 119 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 CT47A1Q5JQC4 288 aaPredicted RBP8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 PPM1JQ5JR12 505 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 MCATQ8IVS2 390 aaKnown RBP8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 CHAC2Q8WUX2 184 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 NINJ1Q92982 152 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 TYW1Q9NV66 732 aaKnown RBP8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 LRP2BPQ9P2M1 347 aa8.62□□□□□ -1.03
AP001960.1-201ENST00000506494 ADCY3O60266 1144 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 MYCLP1P12525 358 aaPredicted RBP8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 POLR2BP30876 1174 aaKnown RBP8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 GBP1P32455 592 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 CD68P34810 354 aaPredicted RBP8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 CCDC181Q5TID7 509 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 SLC6A19Q695T7 634 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 HID1Q8IV36 788 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 DHX37Q8IY37 1157 aaKnown RBP8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 SLFN12Q8IYM2 578 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 PRPF38AQ8NAV1 312 aaKnown RBP8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 ZNF507Q8TCN5 953 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 TMEM87BQ96K49 555 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 POLR3GLQ9BT43 218 aa8.61□□□□□ -1.03
AP001960.1-201ENST00000506494 PMS1P54277 932 aaKnown RBP8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 SETDB1Q15047 1291 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 ZBTB37Q5TC79 503 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 CDC37L1Q7L3B6 337 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 FERMT3Q86UX7 667 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 PPP1R14AQ96A00 147 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 SLC6A18Q96N87 628 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 APBA2Q99767 749 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 FAM86C1Q9NVL1 165 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 TJP2Q9UDY2 1190 aa8.6□□□□□ -1.03
AP001960.1-201ENST00000506494 SYNGAP1Q96PV0 1343 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 ANKRD34BA5PLL1 514 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 IRS4O14654 1257 aaPredicted RBP8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 DDX3YO15523 660 aaKnown RBP8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 PDGFRBP09619 1106 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 RING1Q06587 406 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 PABPC4Q13310 644 aaKnown RBP eCLIP8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 HSP90AA2PQ14568 343 aaPredicted RBP8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 TM4SF20Q53R12 229 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 AKAP4Q5JQC9 854 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 EXOSC6Q5RKV6 272 aaKnown RBP8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 C8orf86Q6ZUL3 223 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 CHSY3Q70JA7 882 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 GALNT11Q8NCW6 608 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 CCDC74BQ96LY2 380 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 KIF2CQ99661 725 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 HOMER2Q9NSB8 354 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 SUCOQ9UBS9 1254 aaKnown RBP8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 NXF1Q9UBU9 619 aaKnown RBP8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 PCDHGC5Q9Y5F6 944 aa8.59□□□□□ -1.03
AP001960.1-201ENST00000506494 TRAV20A0A0B4J274 112 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 RGS13O14921 159 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 CLEC3AO75596 197 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 PARNO95453 639 aaKnown RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 TP53P04637 393 aaPredicted RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 L1CAMP32004 1257 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 SOX5P35711 763 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 HSP90AB2PQ58FF8 381 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 HEATR6Q6AI08 1181 aaKnown RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 MRPL41Q8IXM3 137 aaKnown RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 DMRTC2Q8IXT2 367 aaPredicted RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 KCT2Q8NC54 265 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 STAG1Q8WVM7 1258 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 EDARADDQ8WWZ3 215 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 SMARCC1Q92922 1105 aaPredicted RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 DHRS4Q9BTZ2 278 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 COL25A1Q9BXS0 654 aaPredicted RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 CAAP1Q9H8G2 361 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 STK17AQ9UEE5 414 aa8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 G3BP2Q9UN86 482 aaKnown RBP8.58□□□□□ -1.04
AP001960.1-201ENST00000506494 ADAM11O75078 769 aa8.57□□□□□ -1.04
AP001960.1-201ENST00000506494 RFPL3O75679 317 aa8.57□□□□□ -1.04
AP001960.1-201ENST00000506494 AMPD1P23109 780 aa8.57□□□□□ -1.04
AP001960.1-201ENST00000506494 SRSF11Q05519 484 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms