RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SAP30BPQ9UHR5 308 aaKnown RBP11.04□□□□□ -0.64
TPM3-218ENST00000505010 SERPINA10Q9UK55 444 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 PCDHAC2Q9Y5I4 1007 aa11.04□□□□□ -0.64
TPM3-218ENST00000505010 ASTN2O75129 1339 aaPredicted RBP11.04□□□□□ -0.64
TPM3-218ENST00000505010 SIPA1L1O43166 1804 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 B4E1Z4 1266 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 UBE2Q2LH0YL09 131 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 PRC1O43663 620 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 SLC3A2P08195 630 aaKnown RBP11.03□□□□□ -0.64
TPM3-218ENST00000505010 MCM5P33992 734 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 ANKRD1Q15327 319 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 CFAP100Q494V2 611 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 APOBEC3HQ6NTF7 200 aaKnown RBP11.03□□□□□ -0.64
TPM3-218ENST00000505010 CDC42EP5Q6NZY7 148 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 Q6ZUG5 572 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 MOB2Q70IA6 237 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 CHST3Q7LGC8 479 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 AGBL3Q8NEM8 1001 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 STAG1Q8WVM7 1258 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 LARP6Q9BRS8 491 aaKnown RBP11.03□□□□□ -0.64
TPM3-218ENST00000505010 LRRC2Q9BYS8 371 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 KRT23Q9C075 422 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 CNNM2Q9H8M5 875 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 FOXD4L1Q9NU39 408 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 ANAPC4Q9UJX5 808 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 SZT2Q5T011 3432 aa11.03□□□□□ -0.64
TPM3-218ENST00000505010 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 SMIM22K7EJ46 135 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 POLR3DP05423 398 aaPredicted RBP11.02□□□□□ -0.65
TPM3-218ENST00000505010 EVX2Q03828 476 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 SREBF2Q12772 1141 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 TTLL12Q14166 644 aaPredicted RBP11.02□□□□□ -0.65
TPM3-218ENST00000505010 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 OGFOD1Q8N543 542 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 TMX3Q96JJ7 454 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 GMLQ99445 158 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 MRIQ9BWK5 157 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 ALDH8A1Q9H2A2 487 aaPredicted RBP11.02□□□□□ -0.65
TPM3-218ENST00000505010 SLKQ9H2G2 1235 aaPredicted RBP11.02□□□□□ -0.65
TPM3-218ENST00000505010 INCENPQ9NQS7 918 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 LIMCH1Q9UPQ0 1083 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 WDR19Q8NEZ3 1342 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 HTTP42858 3142 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 ROBO3Q96MS0 1386 aa11.02□□□□□ -0.65
TPM3-218ENST00000505010 KDM4AO75164 1064 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 WDHD1O75717 1129 aaPredicted RBP11.01□□□□□ -0.65
TPM3-218ENST00000505010 CACNB3P54284 484 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 ANTXR2P58335 489 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 EXOSC10Q01780 885 aaKnown RBP11.01□□□□□ -0.65
TPM3-218ENST00000505010 MKRN3Q13064 507 aaKnown RBP11.01□□□□□ -0.65
TPM3-218ENST00000505010 TOB2Q14106 344 aaPredicted RBP11.01□□□□□ -0.65
TPM3-218ENST00000505010 DLGAP5Q15398 846 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 C12orf60Q5U649 245 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 CYB5R4Q7L1T6 521 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 BRF1Q92994 677 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 CFHR5Q9BXR6 569 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 TMOD2Q9NZR1 351 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 TACC3Q9Y6A5 838 aa11.01□□□□□ -0.65
TPM3-218ENST00000505010 SPDYE2BA6NHP3 402 aa11□□□□□ -0.65
TPM3-218ENST00000505010 PRDM1O75626 825 aa11□□□□□ -0.65
TPM3-218ENST00000505010 LARGE1O95461 756 aa11□□□□□ -0.65
TPM3-218ENST00000505010 SPDYE6P0CI01 402 aa11□□□□□ -0.65
TPM3-218ENST00000505010 PCP11498 1178 aaKnown RBP11□□□□□ -0.65
TPM3-218ENST00000505010 ZNF280AP59817 542 aaPredicted RBP11□□□□□ -0.65
TPM3-218ENST00000505010 PDE4BQ07343 736 aa11□□□□□ -0.65
TPM3-218ENST00000505010 NFIAQ12857 509 aa11□□□□□ -0.65
TPM3-218ENST00000505010 NKX2-3Q8TAU0 364 aa11□□□□□ -0.65
TPM3-218ENST00000505010 ESR2Q92731 530 aa11□□□□□ -0.65
TPM3-218ENST00000505010 DYNLL2Q96FJ2 89 aa11□□□□□ -0.65
TPM3-218ENST00000505010 ZSCAN31Q96LW9 406 aaPredicted RBP11□□□□□ -0.65
TPM3-218ENST00000505010 OSBPL5Q9H0X9 879 aaPredicted RBP11□□□□□ -0.65
TPM3-218ENST00000505010 R3HDMLQ9H3Y0 253 aa11□□□□□ -0.65
TPM3-218ENST00000505010 TDRD3Q9H7E2 651 aaKnown RBP11□□□□□ -0.65
TPM3-218ENST00000505010 DDX4Q9NQI0 724 aaKnown RBP11□□□□□ -0.65
TPM3-218ENST00000505010 SH2B1Q9NRF2 756 aaPredicted RBP11□□□□□ -0.65
TPM3-218ENST00000505010 TPCN1Q9ULQ1 816 aa11□□□□□ -0.65
TPM3-218ENST00000505010 NAP1L2Q9ULW6 460 aaPredicted RBP11□□□□□ -0.65
TPM3-218ENST00000505010 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11□□□□□ -0.65
TPM3-218ENST00000505010 PITPNM2Q9BZ72 1349 aa11□□□□□ -0.65
TPM3-218ENST00000505010 PAPPA2Q9BXP8 1791 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 CLRN2A0PK11 232 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 SH2B2O14492 632 aaPredicted RBP10.99□□□□□ -0.65
TPM3-218ENST00000505010 ORC4O43929 436 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 RANBP6O60518 1105 aaKnown RBP10.99□□□□□ -0.65
TPM3-218ENST00000505010 ALDH1A1P00352 501 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 NF2P35240 595 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 APOBRQ0VD83 1088 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 TCP10Q12799 353 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 PRAMEF18Q5VWM3 479 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 PRMT6Q96LA8 375 aaPredicted RBP10.99□□□□□ -0.65
TPM3-218ENST00000505010 MYOZ2Q9NPC6 264 aa10.99□□□□□ -0.65
TPM3-218ENST00000505010 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
TPM3-218ENST00000505010 SCAF8Q9UPN6 1271 aaKnown RBP10.99□□□□□ -0.65
TPM3-218ENST00000505010 COLQQ9Y215 455 aaPredicted RBP10.99□□□□□ -0.65
TPM3-218ENST00000505010 IFIT3O14879 490 aaKnown RBP10.98□□□□□ -0.65
TPM3-218ENST00000505010 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
TPM3-218ENST00000505010 PLCD1P51178 756 aa10.98□□□□□ -0.65
TPM3-218ENST00000505010 STK3Q13188 491 aa10.98□□□□□ -0.65
TPM3-218ENST00000505010 CUL4AQ13619 759 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms