RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 PICK1Q9NRD5 415 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 MTMR7Q9Y216 660 aa4.58□□□□□ -1.68
HMGB3P17-201ENST00000504195 TRHRP34981 398 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 SF3B2Q13435 895 aaKnown RBP4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 ZC3H12AQ5D1E8 599 aaKnown RBP4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 PRPF40BQ6NWY9 871 aaKnown RBP4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 C22orf34Q6ZV56 151 aa4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 LILRA2Q8N149 483 aa4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 SYT8Q8NBV8 401 aa4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 KCT2Q8NC54 265 aa4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 TPX2Q9ULW0 747 aaKnown RBP4.57□□□□□ -1.68
HMGB3P17-201ENST00000504195 EOMESO95936 686 aa4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 SFRP5Q5T4F7 317 aa4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 KCNB2Q92953 911 aa4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 UBE2FQ969M7 185 aa4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 DACT3Q96B18 629 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 INTS4Q96HW7 963 aaKnown RBP4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 CWC22Q9HCG8 908 aaKnown RBP4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 LUC7LQ9NQ29 371 aaKnown RBP4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 CNOT11Q9UKZ1 510 aaKnown RBP4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 TRAK1Q9UPV9 953 aa4.56□□□□□ -1.68
HMGB3P17-201ENST00000504195 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 FZD6O60353 706 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 FGD1P98174 961 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 VMACQ2NL98 169 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 OXR1Q8N573 874 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 PANK1Q8TE04 598 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 EMILIN2Q9BXX0 1053 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 SLITRK6Q9H5Y7 841 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 ZNF552Q9H707 407 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 ZSWIM5Q9P217 1185 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 SLAIN2Q9P270 581 aa4.55□□□□□ -1.68
HMGB3P17-201ENST00000504195 TMEM238LA0A1B0GVL6 79 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 PRR33A8MZF0 331 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 MATN3O15232 486 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 FKBP4Q02790 459 aaKnown RBP eCLIP4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 RTP5Q14D33 572 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 CDC37L1Q7L3B6 337 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 LSRQ86X29 649 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 C19orf44Q9H6X5 657 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 ABCB6Q9NP58 842 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 TMEM39AQ9NV64 488 aa4.54□□□□□ -1.68
HMGB3P17-201ENST00000504195 FANCGO15287 622 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 CPNE3O75131 537 aaKnown RBP4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 CILPO75339 1184 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 GDF5P43026 501 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 ZNF157P51786 506 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 CRB2Q5IJ48 1285 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 TMPRSS7Q7RTY8 843 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 PDZD3Q86UT5 571 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 PDZD8Q8NEN9 1154 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 MRIQ9BWK5 157 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 ADAMTS10Q9H324 1103 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 PPP4R2Q9NY27 417 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 ST14Q9Y5Y6 855 aa4.53□□□□□ -1.68
HMGB3P17-201ENST00000504195 FITM1A5D6W6 292 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 FAAP100Q0VG06 881 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 ZNF746Q6NUN9 644 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 PBXIP1Q96AQ6 731 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 ACSBG1Q96GR2 724 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 COX4I2Q96KJ9 171 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 NPHS2Q9NP85 383 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 SIRT5Q9NXA8 310 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 YBX2Q9Y2T7 364 aaKnown RBP4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 CAPN6Q9Y6Q1 641 aa4.52□□□□□ -1.69
HMGB3P17-201ENST00000504195 LRIG2O94898 1065 aa4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 XRCC5P13010 732 aaKnown RBP4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 ARNTP27540 789 aa4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 MAGEA10P43363 369 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 ARMCX6Q7L4S7 300 aa4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 PPP1R13LQ8WUF5 828 aa4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 SYTL4Q96C24 671 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 CCDC87Q9NVE4 849 aa4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 GPN3Q9UHW5 284 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P17-201ENST00000504195 CBX7O95931 251 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 SRSF3P84103 164 aaKnown RBP4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 PDE3BQ13370 1112 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 MTMR3Q13615 1198 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 PPM1JQ5JR12 505 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 UBXN11Q5T124 520 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 DTHD1Q6ZMT9 781 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 CREG2Q8IUH2 290 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 SULF2Q8IWU5 870 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 GPR160Q9UJ42 338 aa4.5□□□□□ -1.69
HMGB3P17-201ENST00000504195 OR14I1A6ND48 311 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 PRICKLE3O43900 615 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 GADD45BO75293 160 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 NME2P22392 152 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 SSFA2P28290 1259 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 SCARA3Q6AZY7 606 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 CNKSR3Q6P9H4 555 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 ZNF507Q8TCN5 953 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 SCAND2PQ9GZW5 306 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 CACNA2D2Q9NY47 1150 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 MBD1Q9UIS9 605 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 CSADQ9Y600 493 aa4.49□□□□□ -1.69
HMGB3P17-201ENST00000504195 SLITRK5O94991 958 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 ESR1P03372 595 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 C6P13671 934 aa4.48□□□□□ -1.69
HMGB3P17-201ENST00000504195 CYP7A1P22680 504 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms