RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 LBRQ14739 615 aaKnown RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 GJA3Q9Y6H8 435 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 THAP12O43422 761 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 OPA1O60313 960 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 POTEJP0CG39 1038 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 PYGBP11216 843 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CYP2C19P33261 490 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CSE1LP55060 971 aaKnown RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 MARSP56192 900 aaKnown RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 PPP1R7Q15435 360 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 TNNI3KQ59H18 835 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CFAP157Q5JU67 520 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC30Q5VVM6 783 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 GGT6Q6P531 493 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 ZFPM2Q8WW38 1151 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 LZICQ8WZA0 190 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 HPS4Q9NQG7 708 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CCPG1Q9ULG6 757 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 PDE6CP51160 858 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 COG7P83436 770 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 COL19A1Q14993 1142 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CNGA3Q16281 694 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 NXNQ6DKJ4 435 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC84Q86UT8 332 aaPredicted RBP6.95□□□□□ -1.3
CLCN3-204ENST00000504131 PLEKHG4BQ96PX9 1271 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 YIPF2Q9BWQ6 316 aa6.95□□□□□ -1.3
CLCN3-204ENST00000504131 CENPAP49450 140 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 TBL3Q12788 808 aaKnown RBP6.94□□□□□ -1.3
CLCN3-204ENST00000504131 TRIML2Q8N7C3 387 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 DRAXINQ8NBI3 349 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-204ENST00000504131 SCG3Q8WXD2 468 aaKnown RBP6.94□□□□□ -1.3
CLCN3-204ENST00000504131 DHX58Q96C10 678 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 EDEM3Q9BZQ6 932 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 TMOD2Q9NZR1 351 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 SYNDIG1LA6NDD5 238 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 F8VZ95 297 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 EVI5O60447 810 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 SLFN14P0C7P3 912 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 SMARCA1P28370 1054 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 RALGDSQ12967 914 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 SPAG5Q96R06 1193 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 CRBNQ96SW2 442 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 HOMER3Q9NSC5 361 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 DACH1Q9UI36 760 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 LRRIQ3A6PVS8 624 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-204ENST00000504131 SLU7O95391 586 aaKnown RBP6.94□□□□□ -1.3
CLCN3-204ENST00000504131 HARSP12081 509 aaKnown RBP6.94□□□□□ -1.3
CLCN3-204ENST00000504131 NBPF14Q5TI25 921 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 NCAPG2Q86XI2 1143 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 TEX19Q8NA77 164 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 SCYL1Q96KG9 808 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 CEP63Q96MT8 703 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 ZBED2Q9BTP6 218 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 PLVAPQ9BX97 442 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 LZTS1Q9Y250 596 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 LDHBP07195 334 aaKnown RBP6.94□□□□□ -1.3
CLCN3-204ENST00000504131 ANKRD45Q5TZF3 282 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 ANGPTL8Q6UXH0 198 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 C11orf74Q86VG3 221 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 CPXCR1Q8N123 301 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 STAG2Q8N3U4 1231 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 RUFY2Q8WXA3 655 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 ZNF148Q9UQR1 794 aa6.94□□□□□ -1.3
CLCN3-204ENST00000504131 RNF40O75150 1001 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 TNNI2P48788 182 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 DR1Q01658 176 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 NSUN2Q08J23 767 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 RILPL1Q5EBL4 403 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 NT5DC4Q86YG4 428 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 GLMNQ92990 594 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 GPCPD1Q9NPB8 672 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 BAIAP2L1Q9UHR4 511 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 MOSPD1Q9UJG1 213 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 TOPBP1Q92547 1522 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 LRRIQ4A6NIV6 560 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 RBP3P10745 1247 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 GRK2P25098 689 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 COX10Q12887 443 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 ERMNQ8TAM6 284 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 MKL1Q969V6 931 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 DHTKD1Q96HY7 919 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 RASA4BC9J798 803 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 TEX28O15482 410 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 MTA2O94776 668 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 TOP1P11387 765 aaKnown RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 FOSL2P15408 326 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 SOX11P35716 441 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 CCT6AP40227 531 aaKnown RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC6Q16204 474 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 CCDC14Q49A88 953 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 DDX23Q9BUQ8 820 aaKnown RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 VPS37BQ9H9H4 285 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 HACD3Q9P035 362 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 DDX41Q9UJV9 622 aaKnown RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 GOLGA8SH3BPF8 625 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 MBD3O95983 291 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 MAP3K9P80192 1104 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 SNX1Q13596 522 aa6.93□□□□□ -1.3
CLCN3-204ENST00000504131 SKIV2LQ15477 1246 aaKnown RBP6.93□□□□□ -1.3
CLCN3-204ENST00000504131 C6orf163Q5TEZ5 329 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms