RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	TRIM75P	A6NK02	468 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	PDHX	O00330	501 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	PDE1A	P54750	535 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	SPP2	Q13103	211 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	PABPC4	Q13310	644 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	GIMAP6	Q6P9H5	292 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	SDR42E1	Q8WUS8	393 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	EVI5L	Q96CN4	794 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	FSD1	Q9BTV5	496 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	WDR18	Q9BV38	432 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	MCOLN1	Q9GZU1	580 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	DNAJC18	Q9H819	358 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	CABP5	Q9NP86	173 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	PNMA3	Q9UL41	463 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	SLC4A4	Q9Y6R1	1079 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	NAV1	Q8NEY1	1877 aa		12.63	□□□□□ -0.39
FXR1-222	ENST00000498658	SIPA1L1	O43166	1804 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	ATAD5	Q96QE3	1844 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	C19orf81	C9J6K1	198 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	SLURP2	P0DP57	97 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	PLCD1	P51178	756 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	NUCB1	Q02818	461 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	KIF22	Q14807	665 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	SLC4A8	Q2Y0W8	1093 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	CERKL	Q49MI3	558 aa	Predicted RBP	12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	B4GALNT3	Q6L9W6	998 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	GADL1	Q6ZQY3	521 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	ABHD8	Q96I13	439 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	STRBP	Q96SI9	672 aa	Known RBP	12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	LNPK	Q9C0E8	428 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	PUS7L	Q9H0K6	701 aa	Known RBP	12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	R3HDML	Q9H3Y0	253 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	ZBTB21	Q9ULJ3	1066 aa		12.62	□□□□□ -0.39
FXR1-222	ENST00000498658	PHIP	Q8WWQ0	1821 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	USP17L10	C9JJH3	530 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	IGHD	P01880	384 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	BACE1	P56817	501 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	GABPA	Q06546	454 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	MOGS	Q13724	837 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	RRP1B	Q14684	758 aa	Known RBP	12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	ABCB5	Q2M3G0	1257 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	SH3D19	Q5HYK7	790 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	TMOD4	Q9NZQ9	345 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	AGTPBP1	Q9UPW5	1226 aa		12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	DDX60L	Q5H9U9	1706 aa	Known RBP	12.61	□□□□□ -0.39
FXR1-222	ENST00000498658	GPAA1	O43292	621 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	PRKAB2	O43741	272 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	GDF11	O95390	407 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	GNRH1	P01148	92 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	GH2	P01242	217 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	SLFNL1	Q499Z3	407 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	C12orf60	Q5U649	245 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	GPAT2	Q6NUI2	795 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	OSBP2	Q969R2	916 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	NACAP1	Q9BZK3	213 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	OSBPL3	Q9H4L5	887 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	ZNF287	Q9HBT7	754 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	PTPRF	P10586	1907 aa		12.6	□□□□□ -0.39
FXR1-222	ENST00000498658	USP17L12	C9JPN9	530 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	USP17L21	D6R901	530 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	APP	P05067	770 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	OSBP	P22059	807 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	SHMT1	P34896	483 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	USP14	P54578	494 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	SBK1	Q52WX2	424 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	ZMYM1	Q5SVZ6	1142 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	C17orf99	Q6UX52	265 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	CCDC17	Q96LX7	622 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	EFCC1	Q9HA90	598 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	TRIM17	Q9Y577	477 aa		12.59	□□□□□ -0.39
FXR1-222	ENST00000498658	GSG1L2	A8MUP6	293 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	TRIM6-TRIM34	B2RNG4	842 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	PATL2	C9JE40	543 aa	Known RBP	12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	MPHOSPH10	O00566	681 aa	Known RBP	12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	CHGB	P05060	677 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	TDO2	P48775	406 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	HMGCS2	P54868	508 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	PRMT2	P55345	433 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	MTMR2	Q13614	643 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	RAB3GAP1	Q15042	981 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	CTR9	Q6PD62	1173 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	USP17L2	Q6R6M4	530 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	TMEM179	Q6ZVK1	233 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	C16orf86	Q6ZW13	317 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	OTOP1	Q7RTM1	612 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	CCDC84	Q86UT8	332 aa	Predicted RBP	12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	CD99L2	Q8TCZ2	262 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	FEZ1	Q99689	392 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	HELLS	Q9NRZ9	838 aa		12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	12.58	□□□□□ -0.4
FXR1-222	ENST00000498658	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.57	□□□□□ -0.4
FXR1-222	ENST00000498658		M0R2C6	588 aa		12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	SLC3A2	P08195	630 aa	Known RBP	12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	CYP2C8	P10632	490 aa		12.57	□□□□□ -0.4
FXR1-222	ENST00000498658	HOXD10	P28358	340 aa		12.57	□□□□□ -0.4

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