RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 SYT1P21579 422 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 GMPSP49915 693 aaPredicted RBP8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 MMP14P50281 582 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 PRELPP51888 382 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 HMGN5P82970 282 aaKnown RBP8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 PKP1Q13835 747 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 SEC23AQ15436 765 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 NFKBIBQ15653 356 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 ZFPM1Q8IX07 1006 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 ZNF654Q8IZM8 581 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 ENAHQ8N8S7 591 aaPredicted RBP8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 NSUN7Q8NE18 718 aaKnown RBP8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 MYL10Q9BUA6 226 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 KAT14Q9H8E8 782 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 VEZTQ9HBM0 779 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 MYOZ2Q9NPC6 264 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 SWAP70Q9UH65 585 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 SERPINB13Q9UIV8 391 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 HPS5Q9UPZ3 1129 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 CHD4Q14839 1912 aa8.31□□□□□ -1.08
GPATCH4-209ENST00000498641 CCDC196A0A1B0GTZ2 297 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 VPS37CA5D8V6 355 aaPredicted RBP8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 DDTLA6NHG4 134 aaPredicted RBP8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 H3BQV1 296 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 H7C1D1 291 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 MPHOSPH10O00566 681 aaKnown RBP8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 CTDNEP1O95476 244 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 BRD1O95696 1058 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 CALM1P0DP23 149 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 CALM2P0DP24 149 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 CALM3P0DP25 149 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 ZSCAN22P10073 491 aaPredicted RBP8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 RTN1Q16799 776 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 SPDYE2Q495Y8 402 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 IFFO2Q5TF58 517 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 FOXP4Q8IVH2 680 aaPredicted RBP8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 MICALL2Q8IY33 904 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 MTMR14Q8NCE2 650 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 SMARCC2Q8TAQ2 1214 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 DPF2Q92785 391 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 EHD4Q9H223 541 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 TCP11L1Q9NUJ3 509 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 PI4KBQ9UBF8 816 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 CNOT7Q9UIV1 285 aaKnown RBP8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 ZDHHC9Q9Y397 364 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 MYH2Q9UKX2 1941 aa8.3□□□□□ -1.08
GPATCH4-209ENST00000498641 ZNF541Q9H0D2 1346 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 LAMA4Q16363 1823 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 SHTN1A0MZ66 631 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 GOLGA6L22H0YM25 854 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 DDAH1O94760 285 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 YBX3P16989 372 aaKnown RBP eCLIP8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 CDC27P30260 824 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 ADD1P35611 737 aaKnown RBP8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 RCAN1P53805 252 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 ZNF280AP59817 542 aaPredicted RBP8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 GABPAQ06546 454 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 SSRP1Q08945 709 aaKnown RBP8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 PPP2R5BQ15173 497 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 GPR162Q16538 588 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 NBPF9Q3BBW0 867 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 DGKHQ86XP1 1220 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 FANCBQ8NB91 859 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 NEDD1Q8NHV4 660 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 CTCFLQ8NI51 663 aaPredicted RBP8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 FAM151AQ8WW52 585 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 CSRNP1Q96S65 589 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 IL17RBQ9NRM6 502 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 RNF181Q9P0P0 153 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 ORC3Q9UBD5 711 aaPredicted RBP8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 STX8Q9UNK0 236 aa8.29□□□□□ -1.08
GPATCH4-209ENST00000498641 SCN9AQ15858 1988 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 WNT10BO00744 389 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 MCM4P33991 863 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 SHMT1P34896 483 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 TNNI2P48788 182 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 FOSBP53539 338 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 AKAP17AQ02040 695 aaKnown RBP8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 FOXD4L6Q3SYB3 417 aaPredicted RBP8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 TBC1D10BQ4KMP7 808 aaPredicted RBP8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 FKBP1CQ5VVH2 108 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 FOXD4L3Q6VB84 417 aaPredicted RBP8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 SH3BP5LQ7L8J4 393 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 SAMD7Q7Z3H4 446 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 TRIM22Q8IYM9 498 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 GPC2Q8N158 579 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 CCDC82Q8N4S0 544 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 ANKS1AQ92625 1134 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 ZBED3Q96IU2 234 aaPredicted RBP8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 CCDC17Q96LX7 622 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 SLC26A6Q9BXS9 759 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 RBM28Q9NW13 759 aaKnown RBP8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 TAOK2Q9UL54 1235 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 MTMR7Q9Y216 660 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 MTMR6Q9Y217 621 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 ATP6V1DQ9Y5K8 247 aa8.28□□□□□ -1.08
GPATCH4-209ENST00000498641 FAM196BA6NMK8 535 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms