RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 GINM1Q9NU53 330 aa19.22■□□□□ 0.67
CTDSP1-214ENST00000497677 SIPA1L1O43166 1804 aa19.22■□□□□ 0.67
CTDSP1-214ENST00000497677 GDF11O95390 407 aa19.21■□□□□ 0.67
CTDSP1-214ENST00000497677 ZFYP08048 801 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-214ENST00000497677 SHMT1P34896 483 aa19.21■□□□□ 0.67
CTDSP1-214ENST00000497677 SP3Q02447 781 aa19.21■□□□□ 0.67
CTDSP1-214ENST00000497677 CHD1LQ86WJ1 897 aa19.21■□□□□ 0.67
CTDSP1-214ENST00000497677 ZBTB21Q9ULJ3 1066 aa19.21■□□□□ 0.67
CTDSP1-214ENST00000497677 SMIM22K7EJ46 135 aa19.2■□□□□ 0.66
CTDSP1-214ENST00000497677 C17orf99Q6UX52 265 aa19.2■□□□□ 0.66
CTDSP1-214ENST00000497677 SLC4A4Q9Y6R1 1079 aa19.2■□□□□ 0.66
CTDSP1-214ENST00000497677 ADGRA2Q96PE1 1338 aa19.2■□□□□ 0.66
CTDSP1-214ENST00000497677 FOCADQ5VW36 1801 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 USP17L12C9JPN9 530 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 USP17L21D6R901 530 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 SH3D19Q5HYK7 790 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 C12orf60Q5U649 245 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 GADL1Q6ZQY3 521 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 SLC45A1Q9Y2W3 748 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 CDK5RAP2Q96SN8 1893 aa19.19■□□□□ 0.66
CTDSP1-214ENST00000497677 CYP2D7A0A087X1C5 515 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 GSG1L2A8MUP6 293 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 M0R2C6 588 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 GH2P01242 217 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 BACE1P56817 501 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 PKN2Q16513 984 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 CERKLQ49MI3 558 aaPredicted RBP19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 ZMYM1Q5SVZ6 1142 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 CTR9Q6PD62 1173 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 PLEKHM2Q8IWE5 1019 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 CD99L2Q8TCZ2 262 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 DYNLL2Q96FJ2 89 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 ERO1AQ96HE7 468 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 AS3MTQ9HBK9 375 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 AGTPBP1Q9UPW5 1226 aa19.18■□□□□ 0.66
CTDSP1-214ENST00000497677 GPAA1O43292 621 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 CAPN15O75808 1086 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 CYP2C8P10632 490 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 GUCY1A2P33402 732 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 HMGCS2P54868 508 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 LRRFIP1Q32MZ4 808 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 TREML2Q5T2D2 321 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 OTOP1Q7RTM1 612 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 PROCA1Q8NCQ7 364 aaPredicted RBP19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 SLC44A5Q8NCS7 719 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 EVI5LQ96CN4 794 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 SEC62Q99442 399 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 FSD1Q9BTV5 496 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 CPA4Q9UI42 421 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 TAOK2Q9UL54 1235 aa19.17■□□□□ 0.66
CTDSP1-214ENST00000497677 ABCB5Q2M3G0 1257 aa19.16■□□□□ 0.66
CTDSP1-214ENST00000497677 GIMAP6Q6P9H5 292 aa19.16■□□□□ 0.66
CTDSP1-214ENST00000497677 PARK7Q99497 189 aaKnown RBP19.16■□□□□ 0.66
CTDSP1-214ENST00000497677 OSBPL3Q9H4L5 887 aa19.16■□□□□ 0.66
CTDSP1-214ENST00000497677 DOCK1Q14185 1865 aa19.16■□□□□ 0.66
CTDSP1-214ENST00000497677 DDX60LQ5H9U9 1706 aaKnown RBP19.15■□□□□ 0.66
CTDSP1-214ENST00000497677 USP17L10C9JJH3 530 aa19.15■□□□□ 0.66
CTDSP1-214ENST00000497677 BCRP11274 1271 aa19.15■□□□□ 0.66
CTDSP1-214ENST00000497677 MTMR2Q13614 643 aa19.15■□□□□ 0.66
CTDSP1-214ENST00000497677 SBK1Q52WX2 424 aa19.15■□□□□ 0.66
CTDSP1-214ENST00000497677 EPB41L4AQ9HCS5 686 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-214ENST00000497677 TRIM17Q9Y577 477 aa19.15■□□□□ 0.66
CTDSP1-214ENST00000497677 C19orf81C9J6K1 198 aa19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 CDK8P49336 464 aa19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 LACTBP83111 547 aaPredicted RBP19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 FBXO46Q6PJ61 603 aaPredicted RBP19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 C16orf86Q6ZW13 317 aa19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 ARHGAP39Q9C0H5 1083 aa19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 SWAP70Q9UH65 585 aa19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 PHIPQ8WWQ0 1821 aa19.14■□□□□ 0.65
CTDSP1-214ENST00000497677 PATL2C9JE40 543 aaKnown RBP19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 GNAT2P19087 354 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 CTGFP29279 349 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 ACER1Q8TDN7 264 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 DDRGK1Q96HY6 314 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 EFCC1Q9HA90 598 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 CABP5Q9NP86 173 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 EMILIN3Q9NT22 766 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 HPS5Q9UPZ3 1129 aa19.13■□□□□ 0.65
CTDSP1-214ENST00000497677 MYH1P12882 1939 aa19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 FOXP2O15409 715 aa19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 HOXA7P31268 230 aaPredicted RBP19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 SEPT2Q15019 361 aa19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 RAB3GAP1Q15042 981 aa19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 TICAM2Q86XR7 235 aa19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 ARPP21Q9UBL0 812 aaPredicted RBP19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 PTPN22Q9Y2R2 807 aa19.12■□□□□ 0.65
CTDSP1-214ENST00000497677 CCDC85CA6NKD9 419 aa19.11■□□□□ 0.65
CTDSP1-214ENST00000497677 PDE4AP27815 886 aa19.11■□□□□ 0.65
CTDSP1-214ENST00000497677 SIAH1Q8IUQ4 282 aa19.11■□□□□ 0.65
CTDSP1-214ENST00000497677 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
CTDSP1-214ENST00000497677 C12orf42Q96LP6 360 aa19.11■□□□□ 0.65
CTDSP1-214ENST00000497677 KIAA1683Q9H0B3 1180 aa19.11■□□□□ 0.65
CTDSP1-214ENST00000497677 ASCC2Q9H1I8 757 aaPredicted RBP19.11■□□□□ 0.65
CTDSP1-214ENST00000497677 A0A1W2PRG0 241 aa19.1■□□□□ 0.65
CTDSP1-214ENST00000497677 AKR1B1P15121 316 aa19.1■□□□□ 0.65
CTDSP1-214ENST00000497677 USP17L2Q6R6M4 530 aa19.1■□□□□ 0.65
CTDSP1-214ENST00000497677 CCDC129Q6ZRS4 1044 aa19.1■□□□□ 0.65
CTDSP1-214ENST00000497677 AMOTL1Q8IY63 956 aa19.1■□□□□ 0.65
CTDSP1-214ENST00000497677 CCDC17Q96LX7 622 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms