RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 SMC5Q8IY18 1101 aa22.53■■□□□ 1.2
RPN1-208ENST00000497415 ZBTB47Q9UFB7 747 aaPredicted RBP22.53■■□□□ 1.2
RPN1-208ENST00000497415 LOC285556D6RIA3 1793 aa22.53■■□□□ 1.2
RPN1-208ENST00000497415 GDF11O95390 407 aa22.52■■□□□ 1.2
RPN1-208ENST00000497415 CAP1Q01518 475 aa22.52■■□□□ 1.2
RPN1-208ENST00000497415 SHROOM1Q2M3G4 852 aaPredicted RBP22.52■■□□□ 1.2
RPN1-208ENST00000497415 SH3D19Q5HYK7 790 aa22.52■■□□□ 1.2
RPN1-208ENST00000497415 PROCA1Q8NCQ7 364 aaPredicted RBP22.52■■□□□ 1.2
RPN1-208ENST00000497415 STAP2Q9UGK3 403 aa22.52■■□□□ 1.2
RPN1-208ENST00000497415 ZBTB21Q9ULJ3 1066 aa22.52■■□□□ 1.2
RPN1-208ENST00000497415 TRIM17Q9Y577 477 aa22.52■■□□□ 1.2
RPN1-208ENST00000497415 BAZ2AQ9UIF9 1905 aaKnown RBP22.52■■□□□ 1.2
RPN1-208ENST00000497415 CCDC85CA6NKD9 419 aa22.51■■□□□ 1.19
RPN1-208ENST00000497415 RNF113AO15541 343 aaKnown RBP22.51■■□□□ 1.19
RPN1-208ENST00000497415 ZFYP08048 801 aaPredicted RBP22.51■■□□□ 1.19
RPN1-208ENST00000497415 PARK7Q99497 189 aaKnown RBP22.51■■□□□ 1.19
RPN1-208ENST00000497415 TAOK2Q9UL54 1235 aa22.51■■□□□ 1.19
RPN1-208ENST00000497415 AGTPBP1Q9UPW5 1226 aa22.51■■□□□ 1.19
RPN1-208ENST00000497415 HPS5Q9UPZ3 1129 aa22.51■■□□□ 1.19
RPN1-208ENST00000497415 IGHDP01880 384 aa22.5■■□□□ 1.19
RPN1-208ENST00000497415 SHMT1P34896 483 aa22.5■■□□□ 1.19
RPN1-208ENST00000497415 APPBP2Q92624 585 aa22.5■■□□□ 1.19
RPN1-208ENST00000497415 OSBP2Q969R2 916 aa22.5■■□□□ 1.19
RPN1-208ENST00000497415 EFCC1Q9HA90 598 aa22.5■■□□□ 1.19
RPN1-208ENST00000497415 CYP2C8P10632 490 aa22.49■■□□□ 1.19
RPN1-208ENST00000497415 BACE1P56817 501 aa22.49■■□□□ 1.19
RPN1-208ENST00000497415 EVX2Q03828 476 aa22.49■■□□□ 1.19
RPN1-208ENST00000497415 CERKLQ49MI3 558 aaPredicted RBP22.49■■□□□ 1.19
RPN1-208ENST00000497415 STRBPQ96SI9 672 aaKnown RBP22.49■■□□□ 1.19
RPN1-208ENST00000497415 CPA4Q9UI42 421 aa22.49■■□□□ 1.19
RPN1-208ENST00000497415 SLC4A4Q9Y6R1 1079 aa22.49■■□□□ 1.19
RPN1-208ENST00000497415 GH2P01242 217 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 CYP2D6P10635 497 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 BCRP11274 1271 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 PDE1AP54750 535 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 HMGCS2P54868 508 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 LACTBP83111 547 aaPredicted RBP22.48■■□□□ 1.19
RPN1-208ENST00000497415 ARHGEF6Q15052 776 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 LRRFIP1Q32MZ4 808 aaKnown RBP22.48■■□□□ 1.19
RPN1-208ENST00000497415 TREML2Q5T2D2 321 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 PTPN22Q9Y2R2 807 aa22.48■■□□□ 1.19
RPN1-208ENST00000497415 C19orf81C9J6K1 198 aa22.47■■□□□ 1.19
RPN1-208ENST00000497415 C12orf60Q5U649 245 aa22.47■■□□□ 1.19
RPN1-208ENST00000497415 ZSWIM8A7E2V4 1837 aa22.47■■□□□ 1.19
RPN1-208ENST00000497415 USP17L10C9JJH3 530 aa22.46■■□□□ 1.19
RPN1-208ENST00000497415 MTMR2Q13614 643 aa22.46■■□□□ 1.19
RPN1-208ENST00000497415 KIF22Q14807 665 aa22.46■■□□□ 1.19
RPN1-208ENST00000497415 ABCB5Q2M3G0 1257 aa22.46■■□□□ 1.19
RPN1-208ENST00000497415 DDRGK1Q96HY6 314 aa22.46■■□□□ 1.19
RPN1-208ENST00000497415 SWAP70Q9UH65 585 aa22.46■■□□□ 1.19
RPN1-208ENST00000497415 MYH8P13535 1937 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 GSG1L2A8MUP6 293 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 USP17L12C9JPN9 530 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 USP17L21D6R901 530 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 GIMAP6Q6P9H5 292 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 FSD1Q9BTV5 496 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 LNPKQ9C0E8 428 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 ARHGAP39Q9C0H5 1083 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 CABP5Q9NP86 173 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 PNMA3Q9UL41 463 aa22.45■■□□□ 1.18
RPN1-208ENST00000497415 GNRH1P01148 92 aa22.44■■□□□ 1.18
RPN1-208ENST00000497415 GUCY1A2P33402 732 aa22.44■■□□□ 1.18
RPN1-208ENST00000497415 NUCB1Q02818 461 aa22.44■■□□□ 1.18
RPN1-208ENST00000497415 PABPC4Q13310 644 aaKnown RBP eCLIP22.44■■□□□ 1.18
RPN1-208ENST00000497415 CTR9Q6PD62 1173 aa22.44■■□□□ 1.18
RPN1-208ENST00000497415 CHD1LQ86WJ1 897 aa22.44■■□□□ 1.18
RPN1-208ENST00000497415 DYNLL2Q96FJ2 89 aa22.44■■□□□ 1.18
RPN1-208ENST00000497415 TMOD4Q9NZQ9 345 aa22.44■■□□□ 1.18
RPN1-208ENST00000497415 CYP2D7A0A087X1C5 515 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 M0R2C6 588 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 GPAA1O43292 621 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 CTGFP29279 349 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 HOXA7P31268 230 aaPredicted RBP22.43■■□□□ 1.18
RPN1-208ENST00000497415 SBK1Q52WX2 424 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 ZMYM1Q5SVZ6 1142 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 B4GALNT3Q6L9W6 998 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 AMOTL1Q8IY63 956 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 SLC44A5Q8NCS7 719 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 EVI5LQ96CN4 794 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 MGAMO43451 1857 aa22.43■■□□□ 1.18
RPN1-208ENST00000497415 SMIM22K7EJ46 135 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 GNAT2P19087 354 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 RGS19P49795 217 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 RAB3GAP1Q15042 981 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 USP17L2Q6R6M4 530 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 C16orf86Q6ZW13 317 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 SMCR8Q8TEV9 937 aaPredicted RBP22.42■■□□□ 1.18
RPN1-208ENST00000497415 C12orf42Q96LP6 360 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 EMILIN3Q9NT22 766 aa22.42■■□□□ 1.18
RPN1-208ENST00000497415 ARPP21Q9UBL0 812 aaPredicted RBP22.42■■□□□ 1.18
RPN1-208ENST00000497415 OSBPP22059 807 aa22.41■■□□□ 1.18
RPN1-208ENST00000497415 PSMC4P43686 418 aa22.41■■□□□ 1.18
RPN1-208ENST00000497415 CDK8P49336 464 aa22.41■■□□□ 1.18
RPN1-208ENST00000497415 SEC62Q99442 399 aaKnown RBP22.41■■□□□ 1.18
RPN1-208ENST00000497415 KIAA1683Q9H0B3 1180 aa22.41■■□□□ 1.18
RPN1-208ENST00000497415 ASCC2Q9H1I8 757 aaPredicted RBP22.41■■□□□ 1.18
RPN1-208ENST00000497415 PRMT2P55345 433 aa22.4■■□□□ 1.18
RPN1-208ENST00000497415 SEPT2Q15019 361 aa22.4■■□□□ 1.18
RPN1-208ENST00000497415 TICAM2Q86XR7 235 aa22.4■■□□□ 1.18
RPN1-208ENST00000497415 TRIM47Q96LD4 638 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms