RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GH2P01242 217 aa23.18■■□□□ 1.3
HDAC4-212ENST00000495497 CTDSPL2Q05D32 466 aa23.18■■□□□ 1.3
HDAC4-212ENST00000495497 PPARAQ07869 468 aa23.18■■□□□ 1.3
HDAC4-212ENST00000495497 ALX1Q15699 326 aa23.18■■□□□ 1.3
HDAC4-212ENST00000495497 MS4A4AQ96JQ5 239 aa23.18■■□□□ 1.3
HDAC4-212ENST00000495497 ZBTB21Q9ULJ3 1066 aa23.18■■□□□ 1.3
HDAC4-212ENST00000495497 THSD7BQ9C0I4 1608 aa23.18■■□□□ 1.3
HDAC4-212ENST00000495497 MANSC4A6NHS7 340 aaPredicted RBP23.17■■□□□ 1.3
HDAC4-212ENST00000495497 ABCB5Q2M3G0 1257 aa23.17■■□□□ 1.3
HDAC4-212ENST00000495497 RUFY2Q8WXA3 655 aa23.17■■□□□ 1.3
HDAC4-212ENST00000495497 AFG3L2Q9Y4W6 797 aa23.17■■□□□ 1.3
HDAC4-212ENST00000495497 PCNTO95613 3336 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 RAD50Q92878 1312 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 USP17L5A8MUK1 530 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 MPHOSPH10O00566 681 aaKnown RBP23.16■■□□□ 1.3
HDAC4-212ENST00000495497 SGSM2O43147 1006 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 PRDM1O75626 825 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 ASNSP08243 561 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 AKR1B1P15121 316 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 MAP2K1Q02750 393 aaPredicted RBP23.16■■□□□ 1.3
HDAC4-212ENST00000495497 INCENPQ9NQS7 918 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 WBP1LQ9NX94 342 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 TACC3Q9Y6A5 838 aa23.16■■□□□ 1.3
HDAC4-212ENST00000495497 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 ROBO3Q96MS0 1386 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 CCL15-CCL14A0A0B4J2E2 113 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 TRIM75PA6NK02 468 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 GUCY1A2P33402 732 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 TM4SF4P48230 202 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 GTF2A2P52657 109 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 HAND2P61296 217 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 SREBF2Q12772 1141 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 RAB3GAP1Q15042 981 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 CCL15Q16663 113 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 BRI3BPQ8WY22 251 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 PTPN18Q99952 460 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 MKNK2Q9HBH9 465 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 CABP5Q9NP86 173 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 KCNH4Q9UQ05 1017 aa23.15■■□□□ 1.3
HDAC4-212ENST00000495497 HSPA1AP0DMV8 641 aaKnown RBP23.14■■□□□ 1.29
HDAC4-212ENST00000495497 HSPA1BP0DMV9 641 aaKnown RBP23.14■■□□□ 1.29
HDAC4-212ENST00000495497 PTH1RQ03431 593 aa23.14■■□□□ 1.29
HDAC4-212ENST00000495497 SPP2Q13103 211 aa23.14■■□□□ 1.29
HDAC4-212ENST00000495497 SNAPC2Q13487 334 aa23.14■■□□□ 1.29
HDAC4-212ENST00000495497 SEPT2Q15019 361 aa23.14■■□□□ 1.29
HDAC4-212ENST00000495497 DSCC1Q9BVC3 393 aa23.14■■□□□ 1.29
HDAC4-212ENST00000495497 TESPA1A2RU30 521 aaPredicted RBP23.13■■□□□ 1.29
HDAC4-212ENST00000495497 IGF2BP3O00425 579 aaKnown RBP eCLIP23.13■■□□□ 1.29
HDAC4-212ENST00000495497 RASA1P20936 1047 aa23.13■■□□□ 1.29
HDAC4-212ENST00000495497 DGKZQ13574 1117 aa23.13■■□□□ 1.29
HDAC4-212ENST00000495497 ZNF280CQ8ND82 737 aa23.13■■□□□ 1.29
HDAC4-212ENST00000495497 ESYT1Q9BSJ8 1104 aa23.13■■□□□ 1.29
HDAC4-212ENST00000495497 GINM1Q9NU53 330 aa23.13■■□□□ 1.29
HDAC4-212ENST00000495497 ZMYM6O95789 1325 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 CXCL11O14625 94 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 CDC45O75419 566 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 CETPP11597 493 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 IFNL1Q8IU54 200 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 CLEC10AQ8IUN9 316 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 REM2Q8IYK8 340 aaPredicted RBP23.12■■□□□ 1.29
HDAC4-212ENST00000495497 AS3MTQ9HBK9 375 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 RNF186Q9NXI6 227 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 TSKSQ9UJT2 592 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 ANAPC4Q9UJX5 808 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 TAOK2Q9UL54 1235 aa23.12■■□□□ 1.29
HDAC4-212ENST00000495497 ATAD5Q96QE3 1844 aa23.11■■□□□ 1.29
HDAC4-212ENST00000495497 TRPA1O75762 1119 aa23.11■■□□□ 1.29
HDAC4-212ENST00000495497 SLC3A2P08195 630 aaKnown RBP23.11■■□□□ 1.29
HDAC4-212ENST00000495497 INHBEP58166 350 aa23.11■■□□□ 1.29
HDAC4-212ENST00000495497 MOGSQ13724 837 aa23.11■■□□□ 1.29
HDAC4-212ENST00000495497 BEGAINQ9BUH8 593 aa23.11■■□□□ 1.29
HDAC4-212ENST00000495497 NBPF3Q9H094 633 aa23.11■■□□□ 1.29
HDAC4-212ENST00000495497 LAMB1P07942 1786 aa23.1■■□□□ 1.29
HDAC4-212ENST00000495497 A0A0G2JLL6 359 aaPredicted RBP23.1■■□□□ 1.29
HDAC4-212ENST00000495497 PDE4BQ07343 736 aa23.1■■□□□ 1.29
HDAC4-212ENST00000495497 PRRT2Q7Z6L0 340 aaPredicted RBP23.1■■□□□ 1.29
HDAC4-212ENST00000495497 FAM43AQ8N2R8 423 aa23.1■■□□□ 1.29
HDAC4-212ENST00000495497 ACER1Q8TDN7 264 aa23.1■■□□□ 1.29
HDAC4-212ENST00000495497 CCDC17Q96LX7 622 aa23.1■■□□□ 1.29
HDAC4-212ENST00000495497 WDR18Q9BV38 432 aa23.1■■□□□ 1.29
HDAC4-212ENST00000495497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.1■■□□□ 1.29
HDAC4-212ENST00000495497 BTBD19C9JJ37 291 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 FOXN1O15353 648 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 MTMR2Q13614 643 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 FAM47AQ5JRC9 791 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 GADL1Q6ZQY3 521 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 TMEM179Q6ZVK1 233 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 TBC1D10CQ8IV04 446 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 ZNF444Q8N0Y2 327 aaPredicted RBP23.09■■□□□ 1.29
HDAC4-212ENST00000495497 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.09■■□□□ 1.29
HDAC4-212ENST00000495497 TBC1D2Q9BYX2 928 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 PHIPQ8WWQ0 1821 aa23.09■■□□□ 1.29
HDAC4-212ENST00000495497 ZNF213O14771 459 aa23.08■■□□□ 1.29
HDAC4-212ENST00000495497 HMGCS2P54868 508 aa23.08■■□□□ 1.29
HDAC4-212ENST00000495497 ZNF287Q9HBT7 754 aa23.08■■□□□ 1.29
HDAC4-212ENST00000495497 USP17L10C9JJH3 530 aa23.07■■□□□ 1.28
HDAC4-212ENST00000495497 TBC1D8O95759 1140 aa23.07■■□□□ 1.28
HDAC4-212ENST00000495497 ZYXQ15942 572 aaKnown RBP23.07■■□□□ 1.28
HDAC4-212ENST00000495497 GPAT2Q6NUI2 795 aa23.07■■□□□ 1.28
HDAC4-212ENST00000495497 CASC1Q6TDU7 716 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms