RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 MAPKAPK5Q8IW41 473 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 DEFB123Q8N688 67 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 TGFBRAP1Q8WUH2 860 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 UBE2OQ9C0C9 1292 aaKnown RBP17.5■□□□□ 0.39
VARS-228ENST00000495010 GINM1Q9NU53 330 aa17.5■□□□□ 0.39
VARS-228ENST00000495010 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.5■□□□□ 0.39
VARS-228ENST00000495010 IPO8O15397 1037 aaKnown RBP17.49■□□□□ 0.39
VARS-228ENST00000495010 XRCC5P13010 732 aaKnown RBP17.49■□□□□ 0.39
VARS-228ENST00000495010 MAGEA10P43363 369 aaPredicted RBP17.49■□□□□ 0.39
VARS-228ENST00000495010 RARSP54136 660 aaKnown RBP17.49■□□□□ 0.39
VARS-228ENST00000495010 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
VARS-228ENST00000495010 TDHQ8IZJ6 230 aa17.49■□□□□ 0.39
VARS-228ENST00000495010 GTF3C2Q8WUA4 911 aaPredicted RBP17.49■□□□□ 0.39
VARS-228ENST00000495010 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
VARS-228ENST00000495010 SNRKQ9NRH2 765 aa17.49■□□□□ 0.39
VARS-228ENST00000495010 DDX60LQ5H9U9 1706 aaKnown RBP17.49■□□□□ 0.39
VARS-228ENST00000495010 GDF11O95390 407 aa17.48■□□□□ 0.39
VARS-228ENST00000495010 HLA-DOAP06340 250 aa17.48■□□□□ 0.39
VARS-228ENST00000495010 RGS2P41220 211 aa17.48■□□□□ 0.39
VARS-228ENST00000495010 LRIT3Q3SXY7 679 aa17.48■□□□□ 0.39
VARS-228ENST00000495010 ATF7IPQ6VMQ6 1270 aa17.48■□□□□ 0.39
VARS-228ENST00000495010 TXNRD2Q9NNW7 524 aa17.48■□□□□ 0.39
VARS-228ENST00000495010 PEX10O60683 326 aa17.47■□□□□ 0.39
VARS-228ENST00000495010 MNX1P50219 401 aaPredicted RBP17.47■□□□□ 0.39
VARS-228ENST00000495010 ERVK-9P63128 1117 aa17.47■□□□□ 0.39
VARS-228ENST00000495010 ERVK-24P63145 666 aa17.47■□□□□ 0.39
VARS-228ENST00000495010 OS9Q13438 667 aaPredicted RBP17.47■□□□□ 0.39
VARS-228ENST00000495010 MAP3K21Q5TCX8 1036 aa17.47■□□□□ 0.39
VARS-228ENST00000495010 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
VARS-228ENST00000495010 FLT1P17948 1338 aa17.47■□□□□ 0.39
VARS-228ENST00000495010 RANBP2P49792 3224 aaKnown RBP17.46■□□□□ 0.39
VARS-228ENST00000495010 PPP4CP60510 307 aa17.46■□□□□ 0.39
VARS-228ENST00000495010 CACNB2Q08289 660 aaPredicted RBP17.46■□□□□ 0.39
VARS-228ENST00000495010 USP17L2Q6R6M4 530 aa17.46■□□□□ 0.39
VARS-228ENST00000495010 GPR142Q7Z601 462 aa17.46■□□□□ 0.39
VARS-228ENST00000495010 PLEKHH3Q7Z736 793 aa17.46■□□□□ 0.39
VARS-228ENST00000495010 RBPJLQ9UBG7 517 aa17.46■□□□□ 0.39
VARS-228ENST00000495010 SAP30BPQ9UHR5 308 aaKnown RBP17.46■□□□□ 0.39
VARS-228ENST00000495010 ZBTB21Q9ULJ3 1066 aa17.46■□□□□ 0.39
VARS-228ENST00000495010 PLXNB2O15031 1838 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 PNMA6EA0A0J9YXQ4 647 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 GLRX3O76003 335 aaKnown RBP17.45■□□□□ 0.38
VARS-228ENST00000495010 JAG1P78504 1218 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 Q3C1V9 767 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 Q7L0L9 218 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 FRAT1Q92837 279 aaPredicted RBP17.45■□□□□ 0.38
VARS-228ENST00000495010 FEZ1Q99689 392 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 APBA2Q99767 749 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 PFASO15067 1338 aa17.45■□□□□ 0.38
VARS-228ENST00000495010 CCND3P30281 292 aaPredicted RBP17.44■□□□□ 0.38
VARS-228ENST00000495010 CCNA1P78396 465 aa17.44■□□□□ 0.38
VARS-228ENST00000495010 WDR78Q5VTH9 848 aa17.44■□□□□ 0.38
VARS-228ENST00000495010 METTL16Q86W50 562 aaKnown RBP17.44■□□□□ 0.38
VARS-228ENST00000495010 PORCNQ9H237 461 aa17.44■□□□□ 0.38
VARS-228ENST00000495010 DNAJC18Q9H819 358 aa17.44■□□□□ 0.38
VARS-228ENST00000495010 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
VARS-228ENST00000495010 STXBP5LQ9Y2K9 1186 aa17.44■□□□□ 0.38
VARS-228ENST00000495010 IGSF3O75054 1194 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 CYP2E1P05181 493 aaPredicted RBP17.43■□□□□ 0.38
VARS-228ENST00000495010 ZYXQ15942 572 aaKnown RBP17.43■□□□□ 0.38
VARS-228ENST00000495010 CCL14Q16627 93 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 TNNI3KQ59H18 835 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 MORN1Q5T089 497 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 MFSD14CQ5VZR4 134 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 ADGRA1Q86SQ6 560 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 USP6NLQ92738 828 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 EDC3Q96F86 508 aaKnown RBP17.43■□□□□ 0.38
VARS-228ENST00000495010 DBNDD2Q9BQY9 259 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 EMILIN3Q9NT22 766 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 FPGT-TNNI3KV9GXZ4 949 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 MAST2Q6P0Q8 1798 aa17.43■□□□□ 0.38
VARS-228ENST00000495010 SIPA1L1O43166 1804 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L15C9J2P7 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L13C9JLJ4 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L11C9JVI0 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L18D6R9N7 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L22D6RA61 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L17D6RBQ6 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L19D6RCP7 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L20D6RJB6 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 GH2P01242 217 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 COL6A1P12109 1028 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 TRIM27P14373 513 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 USP5P45974 858 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 MDM2Q00987 491 aaPredicted RBP17.42■□□□□ 0.38
VARS-228ENST00000495010 USP17L24Q0WX57 530 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 MAP2K5Q13163 448 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 SHROOM1Q2M3G4 852 aaPredicted RBP17.42■□□□□ 0.38
VARS-228ENST00000495010 LHX8Q68G74 356 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 CLUAP1Q96AJ1 413 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 RABGAP1Q9Y3P9 1069 aa17.42■□□□□ 0.38
VARS-228ENST00000495010 CYP7A1P22680 504 aa17.41■□□□□ 0.38
VARS-228ENST00000495010 ZAP70P43403 619 aa17.41■□□□□ 0.38
VARS-228ENST00000495010 USP14P54578 494 aa17.41■□□□□ 0.38
VARS-228ENST00000495010 DYNLL1P63167 89 aaKnown RBP17.41■□□□□ 0.38
VARS-228ENST00000495010 LRRC26Q2I0M4 334 aa17.41■□□□□ 0.38
VARS-228ENST00000495010 CERS3Q8IU89 383 aa17.41■□□□□ 0.38
VARS-228ENST00000495010 LBHD1Q9BQE6 289 aaPredicted RBP17.41■□□□□ 0.38
VARS-228ENST00000495010 MTMR10Q9NXD2 777 aa17.41■□□□□ 0.38
VARS-228ENST00000495010 IVNS1ABPQ9Y6Y0 642 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms