RNA–Protein interactions for RNA: ENST00000494504.5

KATNA1-208, Transcript of katanin catalytic subunit A1, human

TSL 5

Gene KATNA1, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KATNA1-208	ENST00000494504	HSPA5	P11021	654 aa	Known RBP	9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	CETP	P11597	493 aa		9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	RBM5	P52756	815 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	DIXDC1	Q155Q3	683 aa		9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	CFAP100	Q494V2	611 aa		9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	TXNRD3	Q86VQ6	643 aa		9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	PRMT6	Q96LA8	375 aa	Predicted RBP	9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	COL1A1	P02452	1464 aa	Predicted RBP	9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	ZNF804B	A4D1E1	1349 aa		9.26	□□□□□ -0.93
KATNA1-208	ENST00000494504	ARID5B	Q14865	1188 aa		9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	LYPD8	Q6UX82	237 aa		9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	ANKRD18A	Q8IVF6	992 aa		9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	HELB	Q8NG08	1087 aa	Predicted RBP	9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	COA1	Q9GZY4	146 aa		9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	KDM4C	Q9H3R0	1056 aa		9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	SEMA6B	Q9H3T3	888 aa		9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	CSAD	Q9Y600	493 aa		9.25	□□□□□ -0.93
KATNA1-208	ENST00000494504	SOBP	A7XYQ1	873 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	FOSL2	P15408	326 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	KLRK1	P26718	216 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	FCGRT	P55899	365 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	SNAPC2	Q13487	334 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	CDK15	Q96Q40	435 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	ISCA1	Q9BUE6	129 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	KLF16	Q9BXK1	252 aa	Predicted RBP	9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	TSPYL4	Q9UJ04	414 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	JAG2	Q9Y219	1238 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	ALPK3	Q96L96	1907 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	PSME4	Q14997	1843 aa		9.24	□□□□□ -0.93
KATNA1-208	ENST00000494504	ZIC2	O95409	532 aa	Predicted RBP	9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	FLT3LG	P49771	235 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	MMP14	P50281	582 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	CCT4	P50991	539 aa	Known RBP	9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	CCDC152	Q4G0S7	254 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	CERS5	Q8N5B7	392 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	SNX27	Q96L92	541 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	TBC1D2	Q9BYX2	928 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	C11orf49	Q9H6J7	331 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	PAK6	Q9NQU5	681 aa	Predicted RBP	9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	NUDC	Q9Y266	331 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	MED23	Q9ULK4	1368 aa		9.23	□□□□□ -0.93
KATNA1-208	ENST00000494504	TCP10L2	B9ZVM9	353 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	PDHX	O00330	501 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	MAN1A2	O60476	641 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	VSIG8	P0DPA2	414 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	NR5A1	Q13285	461 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	AGER	Q15109	404 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	USP38	Q8NB14	1042 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	FOXJ1	Q92949	421 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	ZKSCAN4	Q969J2	545 aa	Predicted RBP	9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	DDRGK1	Q96HY6	314 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	CFAP53	Q96M91	514 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	TMEM39B	Q9GZU3	492 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	MINPP1	Q9UNW1	487 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	LAMB1	P07942	1786 aa		9.22	□□□□□ -0.93
KATNA1-208	ENST00000494504	CFAP99	D6REC4	459 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	UPP2	O95045	317 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	CYP2C8	P10632	490 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	EIF4G2	P78344	907 aa	Known RBP eCLIP	9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	C6orf118	Q5T5N4	469 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	ERO1B	Q86YB8	467 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	MTMR14	Q8NCE2	650 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	PLBD2	Q8NHP8	589 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	PPM1E	Q8WY54	764 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	ZCCHC17	Q9NP64	241 aa	Known RBP	9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	CHPF2	Q9P2E5	772 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	MAP10	Q9P2G4	905 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	SNCAIP	Q9Y6H5	919 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	FAM205A	Q6ZU69	1335 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	ADGRA2	Q96PE1	1338 aa		9.21	□□□□□ -0.94
KATNA1-208	ENST00000494504	F12	P00748	615 aa	Predicted RBP	9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	ALYREF	Q86V81	257 aa	Known RBP	9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	ITPKC	Q96DU7	683 aa		9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	TEPSIN	Q96N21	525 aa		9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	WRNIP1	Q96S55	665 aa		9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	TTYH1	Q9H313	450 aa	Predicted RBP	9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	TDRD3	Q9H7E2	651 aa	Known RBP	9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	ZFAND3	Q9H8U3	227 aa		9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	ZNF70	Q9UC06	446 aa	Predicted RBP	9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	OTOF	Q9HC10	1997 aa		9.2	□□□□□ -0.94
KATNA1-208	ENST00000494504	TNPO2	O14787	897 aa	Known RBP	9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	SPTLC1	O15269	473 aa		9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	TNFAIP1	Q13829	316 aa		9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	KRT24	Q2M2I5	525 aa		9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	ANKRD23	Q86SG2	305 aa		9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	BPHL	Q86WA6	291 aa	Predicted RBP	9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	LBHD1	Q9BQE6	289 aa	Predicted RBP	9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	PCDHB15	Q9Y5E8	787 aa		9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	CDH23	Q9H251	3354 aa		9.19	□□□□□ -0.94
KATNA1-208	ENST00000494504	SNAP23	O00161	211 aa		9.18	□□□□□ -0.94
KATNA1-208	ENST00000494504	PFAS	O15067	1338 aa		9.18	□□□□□ -0.94
KATNA1-208	ENST00000494504	PER1	O15534	1290 aa	Predicted RBP	9.18	□□□□□ -0.94
KATNA1-208	ENST00000494504	PDE8A	O60658	829 aa		9.18	□□□□□ -0.94
KATNA1-208	ENST00000494504	NEFM	P07197	916 aa		9.18	□□□□□ -0.94
KATNA1-208	ENST00000494504	BCR	P11274	1271 aa		9.18	□□□□□ -0.94
KATNA1-208	ENST00000494504	BMP2	P12643	396 aa		9.18	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms