RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 GPAA1O43292 621 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 TBC1D12O60347 775 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 ZFYP08048 801 aaPredicted RBP14.03□□□□□ -0.16
UBA3-211ENST00000493957 PLCD1P51178 756 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 ZMYM1Q5SVZ6 1142 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 RILPL2Q969X0 211 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 EVI5LQ96CN4 794 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 DHX36Q9H2U1 1008 aaKnown RBP14.03□□□□□ -0.16
UBA3-211ENST00000493957 MCM9Q9NXL9 1143 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 SLC4A4Q9Y6R1 1079 aa14.03□□□□□ -0.16
UBA3-211ENST00000493957 IRF6O14896 467 aa14.02□□□□□ -0.17
UBA3-211ENST00000493957 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.17
UBA3-211ENST00000493957 GSPT1P15170 499 aaKnown RBP14.02□□□□□ -0.17
UBA3-211ENST00000493957 METTL16Q86W50 562 aaKnown RBP14.02□□□□□ -0.17
UBA3-211ENST00000493957 ERO1BQ86YB8 467 aa14.02□□□□□ -0.17
UBA3-211ENST00000493957 SCYL3Q8IZE3 742 aa14.02□□□□□ -0.17
UBA3-211ENST00000493957 MS4A4AQ96JQ5 239 aa14.02□□□□□ -0.17
UBA3-211ENST00000493957 FAM227BQ96M60 508 aa14.02□□□□□ -0.17
UBA3-211ENST00000493957 EPB41L4AQ9HCS5 686 aaPredicted RBP14.02□□□□□ -0.17
UBA3-211ENST00000493957 GREB1LQ9C091 1923 aaPredicted RBP14.02□□□□□ -0.17
UBA3-211ENST00000493957 ZSWIM8A7E2V4 1837 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 LAMA4Q16363 1823 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 A0A0D9SFI3 127 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 GSG1L2A8MUP6 293 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 IGF2BP3O00425 579 aaKnown RBP eCLIP14.01□□□□□ -0.17
UBA3-211ENST00000493957 GDF11O95390 407 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
UBA3-211ENST00000493957 HLA-DOAP06340 250 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 NEFLP07196 543 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 HSPA8P11142 646 aaKnown RBP14.01□□□□□ -0.17
UBA3-211ENST00000493957 PTPRAP18433 802 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 CRACR2BQ8N4Y2 399 aaPredicted RBP14.01□□□□□ -0.17
UBA3-211ENST00000493957 SLC44A5Q8NCS7 719 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 DYNLL2Q96FJ2 89 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 PTPN18Q99952 460 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 RNF186Q9NXI6 227 aa14.01□□□□□ -0.17
UBA3-211ENST00000493957 HERC5Q9UII4 1024 aaKnown RBP14.01□□□□□ -0.17
UBA3-211ENST00000493957 MYH4Q9Y623 1939 aa14□□□□□ -0.17
UBA3-211ENST00000493957 MANSC4A6NHS7 340 aaPredicted RBP14□□□□□ -0.17
UBA3-211ENST00000493957 FOXP2O15409 715 aa14□□□□□ -0.17
UBA3-211ENST00000493957 CTNND1O60716 968 aaKnown RBP14□□□□□ -0.17
UBA3-211ENST00000493957 TRPA1O75762 1119 aa14□□□□□ -0.17
UBA3-211ENST00000493957 TM4SF4P48230 202 aa14□□□□□ -0.17
UBA3-211ENST00000493957 NMIQ13287 307 aaPredicted RBP14□□□□□ -0.17
UBA3-211ENST00000493957 PPIL2Q13356 520 aa14□□□□□ -0.17
UBA3-211ENST00000493957 TTC22Q5TAA0 569 aa14□□□□□ -0.17
UBA3-211ENST00000493957 CENPQQ7L2Z9 268 aaPredicted RBP14□□□□□ -0.17
UBA3-211ENST00000493957 FOXP4Q8IVH2 680 aaPredicted RBP14□□□□□ -0.17
UBA3-211ENST00000493957 BRI3BPQ8WY22 251 aa14□□□□□ -0.17
UBA3-211ENST00000493957 TMEM121BQ9BXQ6 578 aaPredicted RBP14□□□□□ -0.17
UBA3-211ENST00000493957 ATP8A2Q9NTI2 1148 aa14□□□□□ -0.17
UBA3-211ENST00000493957 USP17L12C9JPN9 530 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 USP17L21D6R901 530 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 SHMT1P34896 483 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 CAP2P40123 477 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 LBX1P52954 281 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 PPATQ06203 517 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 GABPAQ06546 454 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 CTR9Q6PD62 1173 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 TTC6Q86TZ1 520 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 ZNF589Q86UQ0 364 aaPredicted RBP13.99□□□□□ -0.17
UBA3-211ENST00000493957 CCDC136Q96JN2 1154 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 EHD4Q9H223 541 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 R3HDMLQ9H3Y0 253 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 PICK1Q9NRD5 415 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 SERPINB13Q9UIV8 391 aa13.99□□□□□ -0.17
UBA3-211ENST00000493957 CCL15-CCL14A0A0B4J2E2 113 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 TESPA1A2RU30 521 aaPredicted RBP13.98□□□□□ -0.17
UBA3-211ENST00000493957 TBC1D8O95759 1140 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 SDSP20132 328 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 SREBF2Q12772 1141 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 MOGSQ13724 837 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 CCL15Q16663 113 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
UBA3-211ENST00000493957 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 VPS53Q5VIR6 699 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 TATDN1Q6P1N9 297 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 IFNL1Q8IU54 200 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 BEGAINQ9BUH8 593 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 KCNH4Q9UQ05 1017 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 ZHX2Q9Y6X8 837 aa13.98□□□□□ -0.17
UBA3-211ENST00000493957 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
UBA3-211ENST00000493957 DGKZQ13574 1117 aa13.97□□□□□ -0.17
UBA3-211ENST00000493957 STK11IPQ8N1F8 1099 aa13.97□□□□□ -0.17
UBA3-211ENST00000493957 FAM43AQ8N2R8 423 aa13.97□□□□□ -0.17
UBA3-211ENST00000493957 IL25Q9H293 177 aa13.97□□□□□ -0.17
UBA3-211ENST00000493957 ZBTB21Q9ULJ3 1066 aa13.97□□□□□ -0.17
UBA3-211ENST00000493957 AFG3L2Q9Y4W6 797 aa13.97□□□□□ -0.17
UBA3-211ENST00000493957 MGAMO43451 1857 aa13.97□□□□□ -0.17
UBA3-211ENST00000493957 TRIM75PA6NK02 468 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 GH2P01242 217 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 APPP05067 770 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 TDO2P48775 406 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 GTF2A2P52657 109 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 SNAPC2Q13487 334 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 IFNL3Q8IZI9 196 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 TMEM106CQ9BVX2 250 aa13.96□□□□□ -0.17
UBA3-211ENST00000493957 HELLSQ9NRZ9 838 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms