RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 OGDHLQ9ULD0 1010 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 FLT1P17948 1338 aa16.85■□□□□ 0.29
SAMM50-204ENST00000493161 DLL1O00548 723 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 BCAR3O75815 825 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 PRKAR2AP13861 404 aaKnown RBP16.84■□□□□ 0.29
SAMM50-204ENST00000493161 BMP8BP34820 402 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 HERVK_113P62684 666 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 CLUAP1Q96AJ1 413 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 DBNDD2Q9BQY9 259 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 PORCNQ9H237 461 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 DHX36Q9H2U1 1008 aaKnown RBP16.84■□□□□ 0.29
SAMM50-204ENST00000493161 TMOD4Q9NZQ9 345 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 SAP30BPQ9UHR5 308 aaKnown RBP16.84■□□□□ 0.29
SAMM50-204ENST00000493161 PFASO15067 1338 aa16.84■□□□□ 0.29
SAMM50-204ENST00000493161 CYP2E1P05181 493 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-204ENST00000493161 ASNSP08243 561 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 MAGEA10P43363 369 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-204ENST00000493161 PPP4CP60510 307 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 DYNLL1P63167 89 aaKnown RBP16.83■□□□□ 0.28
SAMM50-204ENST00000493161 CCL14Q16627 93 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 Q7L0L9 218 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 METTL16Q86W50 562 aaKnown RBP16.83■□□□□ 0.28
SAMM50-204ENST00000493161 GPRC5AQ8NFJ5 357 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 FRAT1Q92837 279 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-204ENST00000493161 CDK5RAP2Q96SN8 1893 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 NUDT12Q9BQG2 462 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 NOL10Q9BSC4 688 aaKnown RBP16.83■□□□□ 0.28
SAMM50-204ENST00000493161 PIH1D3Q9NQM4 214 aaKnown RBP16.83■□□□□ 0.28
SAMM50-204ENST00000493161 EMILIN3Q9NT22 766 aa16.83■□□□□ 0.28
SAMM50-204ENST00000493161 MAST2Q6P0Q8 1798 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 USP17L10C9JJH3 530 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 BAG3O95817 575 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 CACNB2Q08289 660 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-204ENST00000493161 TNNI3KQ59H18 835 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 TTC39AQ5SRH9 613 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 FOXP4Q8IVH2 680 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-204ENST00000493161 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-204ENST00000493161 USP6NLQ92738 828 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 ZBTB21Q9ULJ3 1066 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 FPGT-TNNI3KV9GXZ4 949 aa16.82■□□□□ 0.28
SAMM50-204ENST00000493161 MYO5AQ9Y4I1 1855 aaKnown RBP16.82■□□□□ 0.28
SAMM50-204ENST00000493161 C19orf81C9J6K1 198 aa16.81■□□□□ 0.28
SAMM50-204ENST00000493161 XRCC5P13010 732 aaKnown RBP16.81■□□□□ 0.28
SAMM50-204ENST00000493161 CCND3P30281 292 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-204ENST00000493161 ZAP70P43403 619 aa16.81■□□□□ 0.28
SAMM50-204ENST00000493161 POLA2Q14181 598 aa16.81■□□□□ 0.28
SAMM50-204ENST00000493161 ATF7IPQ6VMQ6 1270 aa16.81■□□□□ 0.28
SAMM50-204ENST00000493161 PAGR1Q9BTK6 254 aa16.81■□□□□ 0.28
SAMM50-204ENST00000493161 FOCADQ5VW36 1801 aa16.81■□□□□ 0.28
SAMM50-204ENST00000493161 PLCG2P16885 1265 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 ERVK-9P63128 1117 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 ERVK-24P63145 666 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 MORN1Q5T089 497 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 LHX8Q68G74 356 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 GPR142Q7Z601 462 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 DEFB123Q8N688 67 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 TRIM34Q9BYJ4 488 aa16.8■□□□□ 0.28
SAMM50-204ENST00000493161 TLR7Q9NYK1 1049 aaKnown RBP16.8■□□□□ 0.28
SAMM50-204ENST00000493161 CNMDO75829 334 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 GH2P01242 217 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 COL6A1P12109 1028 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
SAMM50-204ENST00000493161 MAPK4P31152 587 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 ZYXQ15942 572 aaKnown RBP16.79■□□□□ 0.28
SAMM50-204ENST00000493161 LRRC26Q2I0M4 334 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 CCDC158Q5M9N0 1113 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 TMEM57Q8N5G2 664 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 SOCS4Q8WXH5 440 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 NDUFB9Q9Y6M9 179 aa16.79■□□□□ 0.28
SAMM50-204ENST00000493161 IPO8O15397 1037 aaKnown RBP16.78■□□□□ 0.28
SAMM50-204ENST00000493161 PDE3AQ14432 1141 aa16.78■□□□□ 0.28
SAMM50-204ENST00000493161 PLEKHH3Q7Z736 793 aa16.78■□□□□ 0.28
SAMM50-204ENST00000493161 TDHQ8IZJ6 230 aa16.78■□□□□ 0.28
SAMM50-204ENST00000493161 MIGA1Q8NAN2 632 aa16.78■□□□□ 0.28
SAMM50-204ENST00000493161 C1orf115Q9H7X2 142 aa16.78■□□□□ 0.28
SAMM50-204ENST00000493161 FLRT1Q9NZU1 646 aa16.78■□□□□ 0.28
SAMM50-204ENST00000493161 DBNLQ9UJU6 430 aaKnown RBP16.78■□□□□ 0.28
SAMM50-204ENST00000493161 SURF6O75683 361 aaKnown RBP16.77■□□□□ 0.28
SAMM50-204ENST00000493161 CYP7A1P22680 504 aa16.77■□□□□ 0.28
SAMM50-204ENST00000493161 RGS2P41220 211 aa16.77■□□□□ 0.28
SAMM50-204ENST00000493161 ATP8B2P98198 1209 aa16.77■□□□□ 0.28
SAMM50-204ENST00000493161 OS9Q13438 667 aaPredicted RBP16.77■□□□□ 0.28
SAMM50-204ENST00000493161 LRIT3Q3SXY7 679 aa16.77■□□□□ 0.28
SAMM50-204ENST00000493161 USP17L2Q6R6M4 530 aa16.77■□□□□ 0.28
SAMM50-204ENST00000493161 SSH3Q8TE77 659 aa16.77■□□□□ 0.28
SAMM50-204ENST00000493161 UBE2OQ9C0C9 1292 aaKnown RBP16.77■□□□□ 0.28
SAMM50-204ENST00000493161 CCDC8Q9H0W5 538 aaPredicted RBP16.77■□□□□ 0.28
SAMM50-204ENST00000493161 GINM1Q9NU53 330 aa16.77■□□□□ 0.28
SAMM50-204ENST00000493161 A0A0C4DFX4 3053 aa16.77■□□□□ 0.27
SAMM50-204ENST00000493161 HLA-DOAP06340 250 aa16.76■□□□□ 0.27
SAMM50-204ENST00000493161 GPR153Q6NV75 609 aa16.76■□□□□ 0.27
SAMM50-204ENST00000493161 CCAR1Q8IX12 1150 aaKnown RBP16.76■□□□□ 0.27
SAMM50-204ENST00000493161 ZNF512BQ96KM6 892 aaPredicted RBP16.76■□□□□ 0.27
SAMM50-204ENST00000493161 APBA2Q99767 749 aa16.76■□□□□ 0.27
SAMM50-204ENST00000493161 MDM2Q00987 491 aaPredicted RBP16.75■□□□□ 0.27
SAMM50-204ENST00000493161 TATDN1Q6P1N9 297 aa16.75■□□□□ 0.27
SAMM50-204ENST00000493161 TRMT44Q8IYL2 757 aaKnown RBP16.75■□□□□ 0.27
SAMM50-204ENST00000493161 ACER1Q8TDN7 264 aa16.75■□□□□ 0.27
SAMM50-204ENST00000493161 EAF2Q96CJ1 260 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 280.8 ms