RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 S1PR4O95977 384 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 F13A1P00488 732 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 SYT1P21579 422 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 GJB2P29033 226 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 DEKP35659 375 aaKnown RBP7.45□□□□□ -1.22
SF3A3-208ENST00000489537 LIFRP42702 1097 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 MRE11P49959 708 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 KRT85P78386 507 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 MFSD6Q6ZSS7 791 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 MAGEB6Q8N7X4 407 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 CRNKL1Q9BZJ0 848 aaKnown RBP7.45□□□□□ -1.22
SF3A3-208ENST00000489537 SLC6A16Q9GZN6 736 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 PUS7LQ9H0K6 701 aaKnown RBP7.45□□□□□ -1.22
SF3A3-208ENST00000489537 ATP8A2Q9NTI2 1148 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 RAI14Q9P0K7 980 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 TPCN1Q9ULQ1 816 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 PARP3Q9Y6F1 533 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 SBF1O95248 1867 aa7.45□□□□□ -1.22
SF3A3-208ENST00000489537 COL11A2P13942 1736 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 ARFGEF1Q9Y6D6 1849 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 TCRBV5S4A2TA0A5A2 114 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 M0R2C6 588 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 CALM1P0DP23 149 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 CALM2P0DP24 149 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 CALM3P0DP25 149 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 CYP7A1P22680 504 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 FECHP22830 423 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 TDO2P48775 406 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 HTRA3P83110 453 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 TOB2Q14106 344 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 ME3Q16798 604 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 AKNAD1Q5T1N1 836 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 C9orf131Q5VYM1 1079 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 CC2D2BQ6DHV5 1058 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 MCTP1Q6DN14 999 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 PRR5LQ6MZQ0 368 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 CCDC129Q6ZRS4 1044 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 NOL8Q76FK4 1167 aaKnown RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 SGMS1Q86VZ5 419 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 CCDC83Q8IWF9 413 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 SCUBE3Q8IX30 993 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 HELBQ8NG08 1087 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 STAG1Q8WVM7 1258 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 ESR2Q92731 530 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 BRF1Q92994 677 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 FAM84BQ96KN1 310 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 ZNF396Q96N95 335 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 SEC62Q99442 399 aaKnown RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 EYA3Q99504 573 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 GPBP1L1Q9HC44 474 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 PIH1D3Q9NQM4 214 aaKnown RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 ANAPC4Q9UJX5 808 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 GGA1Q9UJY5 639 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 ANGEL1Q9UNK9 670 aaKnown RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 ELP1O95163 1332 aa7.44□□□□□ -1.22
SF3A3-208ENST00000489537 DDX60Q8IY21 1712 aaKnown RBP7.44□□□□□ -1.22
SF3A3-208ENST00000489537 GOLGA6L4A6NEF3 574 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 GPR37O15354 613 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 PRC1O43663 620 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 MBD4O95243 580 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 LDHBP07195 334 aaKnown RBP7.43□□□□□ -1.22
SF3A3-208ENST00000489537 NPR1P16066 1061 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 XBP1P17861 261 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 UBE2HP62256 183 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 PDE4BQ07343 736 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 SCARF1Q14162 830 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 IQCA1Q86XH1 822 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 DZIP1Q86YF9 867 aaKnown RBP7.43□□□□□ -1.22
SF3A3-208ENST00000489537 SP8Q8IXZ3 490 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 IFNL3Q8IZI9 196 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 FAM177A1Q8N128 213 aaPredicted RBP7.43□□□□□ -1.22
SF3A3-208ENST00000489537 CELF1Q92879 486 aaKnown RBP7.43□□□□□ -1.22
SF3A3-208ENST00000489537 SPSB2Q99619 263 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 ARPP21Q9UBL0 812 aaPredicted RBP7.43□□□□□ -1.22
SF3A3-208ENST00000489537 ABCF2Q9UG63 623 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 NDUFB9Q9Y6M9 179 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 SLC4A4Q9Y6R1 1079 aa7.43□□□□□ -1.22
SF3A3-208ENST00000489537 VPS37CA5D8V6 355 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-208ENST00000489537 CCDC69A6NI79 296 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 NFKBIEO00221 500 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 CAVIN2O95810 425 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 TRIM29Q14134 588 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 PUS10Q3MIT2 529 aaKnown RBP7.42□□□□□ -1.22
SF3A3-208ENST00000489537 SBK1Q52WX2 424 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 DALRD3Q5D0E6 543 aaKnown RBP7.42□□□□□ -1.22
SF3A3-208ENST00000489537 OLFM4Q6UX06 510 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 BRAPQ7Z569 592 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 MB21D2Q8IYB1 491 aaPredicted RBP7.42□□□□□ -1.22
SF3A3-208ENST00000489537 TRIM22Q8IYM9 498 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 TDRD7Q8NHU6 1098 aaKnown RBP7.42□□□□□ -1.22
SF3A3-208ENST00000489537 SMARCC2Q8TAQ2 1214 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 UBAC1Q9BSL1 405 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 LMBRD1Q9NUN5 540 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 PIM2Q9P1W9 311 aa7.42□□□□□ -1.22
SF3A3-208ENST00000489537 DLEC1Q9Y238 1755 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 SLX4Q8IY92 1834 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 GSG1L2A8MUP6 293 aa7.41□□□□□ -1.22
SF3A3-208ENST00000489537 POTECB2RU33 542 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms