RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 U3KPZ7 1027 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-224ENST00000488927 PTPRAP18433 802 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 MAP2K2P36507 400 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 NT5C2P49902 561 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 EVX2Q03828 476 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 GRM1Q13255 1194 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 PPIL2Q13356 520 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 IMMTQ16891 758 aaKnown RBP18.97■□□□□ 0.63
HDAC7-224ENST00000488927 ABCB5Q2M3G0 1257 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 AS3MTQ9HBK9 375 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 OTOFQ9HC10 1997 aa18.97■□□□□ 0.63
HDAC7-224ENST00000488927 USP17L5A8MUK1 530 aa18.96■□□□□ 0.63
HDAC7-224ENST00000488927 EIF5BO60841 1220 aaKnown RBP18.96■□□□□ 0.63
HDAC7-224ENST00000488927 DNAJC5GQ8N7S2 189 aa18.96■□□□□ 0.63
HDAC7-224ENST00000488927 SLC44A5Q8NCS7 719 aa18.96■□□□□ 0.63
HDAC7-224ENST00000488927 MAP4K1Q92918 833 aa18.96■□□□□ 0.63
HDAC7-224ENST00000488927 OTUD5Q96G74 571 aa18.96■□□□□ 0.63
HDAC7-224ENST00000488927 RNF41Q9H4P4 317 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-224ENST00000488927 ANO2Q9NQ90 1003 aa18.96■□□□□ 0.63
HDAC7-224ENST00000488927 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.96■□□□□ 0.63
HDAC7-224ENST00000488927 ZBTB21Q9ULJ3 1066 aa18.96■□□□□ 0.63
HDAC7-224ENST00000488927 GDF11O95390 407 aa18.95■□□□□ 0.62
HDAC7-224ENST00000488927 RRP1BQ14684 758 aaKnown RBP18.95■□□□□ 0.62
HDAC7-224ENST00000488927 TMEM179Q6ZVK1 233 aa18.95■□□□□ 0.62
HDAC7-224ENST00000488927 ZNF444Q8N0Y2 327 aaPredicted RBP18.95■□□□□ 0.62
HDAC7-224ENST00000488927 ZHX2Q9Y6X8 837 aa18.95■□□□□ 0.62
HDAC7-224ENST00000488927 LAMB1P07942 1786 aa18.95■□□□□ 0.62
HDAC7-224ENST00000488927 MANSC4A6NHS7 340 aaPredicted RBP18.94■□□□□ 0.62
HDAC7-224ENST00000488927 SMIM22K7EJ46 135 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 MPHOSPH10O00566 681 aaKnown RBP18.94■□□□□ 0.62
HDAC7-224ENST00000488927 REC8O95072 547 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 GH2P01242 217 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 FGRP09769 529 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 GTF2A2P52657 109 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 INHBEP58166 350 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 PTH1RQ03431 593 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 SREBF2Q12772 1141 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 LSG1Q9H089 658 aaKnown RBP18.94■□□□□ 0.62
HDAC7-224ENST00000488927 DOCK1Q14185 1865 aa18.94■□□□□ 0.62
HDAC7-224ENST00000488927 CXCL11O14625 94 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 ORC4O43929 436 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 RASA1P20936 1047 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 CTDSPL2Q05D32 466 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 SNAPC2Q13487 334 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 AKNAD1Q5T1N1 836 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 MFSD6Q6ZSS7 791 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 STK11IPQ8N1F8 1099 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 ZNF280CQ8ND82 737 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 STAG1Q8WVM7 1258 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 WDR18Q9BV38 432 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 KCNH4Q9UQ05 1017 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.93■□□□□ 0.62
HDAC7-224ENST00000488927 AFG3L2Q9Y4W6 797 aa18.93■□□□□ 0.62
HDAC7-224ENST00000488927 IRF6O14896 467 aa18.92■□□□□ 0.62
HDAC7-224ENST00000488927 EPB41L2O43491 1005 aaKnown RBP18.92■□□□□ 0.62
HDAC7-224ENST00000488927 GJA5P36382 358 aa18.92■□□□□ 0.62
HDAC7-224ENST00000488927 HAND2P61296 217 aa18.92■□□□□ 0.62
HDAC7-224ENST00000488927 RAB3GAP1Q15042 981 aa18.92■□□□□ 0.62
HDAC7-224ENST00000488927 CNKSR2Q8WXI2 1034 aa18.92■□□□□ 0.62
HDAC7-224ENST00000488927 AOC2O75106 756 aa18.91■□□□□ 0.62
HDAC7-224ENST00000488927 PRDM1O75626 825 aa18.91■□□□□ 0.62
HDAC7-224ENST00000488927 CETPP11597 493 aa18.91■□□□□ 0.62
HDAC7-224ENST00000488927 AKR1B1P15121 316 aa18.91■□□□□ 0.62
HDAC7-224ENST00000488927 KIF23Q02241 960 aaPredicted RBP18.91■□□□□ 0.62
HDAC7-224ENST00000488927 MKRN3Q13064 507 aaKnown RBP18.91■□□□□ 0.62
HDAC7-224ENST00000488927 PPP4R3BQ5MIZ7 849 aa18.91■□□□□ 0.62
HDAC7-224ENST00000488927 CNNM2Q9H8M5 875 aa18.91■□□□□ 0.62
HDAC7-224ENST00000488927 KANSL2Q9H9L4 492 aa18.91■□□□□ 0.62
HDAC7-224ENST00000488927 RBM8AQ9Y5S9 174 aaKnown RBP18.91■□□□□ 0.62
HDAC7-224ENST00000488927 TSPY3P0CV98 308 aa18.9■□□□□ 0.62
HDAC7-224ENST00000488927 TSPY8P0CW00 308 aa18.9■□□□□ 0.62
HDAC7-224ENST00000488927 JAG1P78504 1218 aa18.9■□□□□ 0.62
HDAC7-224ENST00000488927 MAP2K1Q02750 393 aaPredicted RBP18.9■□□□□ 0.62
HDAC7-224ENST00000488927 SEPT2Q15019 361 aa18.9■□□□□ 0.62
HDAC7-224ENST00000488927 RNF20Q5VTR2 975 aa18.9■□□□□ 0.62
HDAC7-224ENST00000488927 TOMM22Q9NS69 142 aa18.9■□□□□ 0.62
HDAC7-224ENST00000488927 THSD7BQ9C0I4 1608 aa18.89■□□□□ 0.62
HDAC7-224ENST00000488927 TESPA1A2RU30 521 aaPredicted RBP18.89■□□□□ 0.61
HDAC7-224ENST00000488927 TSPY2A6NKD2 308 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 C19orf81C9J6K1 198 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 TM4SF4P48230 202 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 SPP2Q13103 211 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 OTUD7BQ6GQQ9 843 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 FASTKD5Q7L8L6 764 aaKnown RBP18.89■□□□□ 0.61
HDAC7-224ENST00000488927 TBC1D10CQ8IV04 446 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 NEDD1Q8NHV4 660 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 ESR2Q92731 530 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 MS4A4AQ96JQ5 239 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 KRT23Q9C075 422 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 NBPF3Q9H094 633 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 SH2D4AQ9H788 454 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 ARHGEF10LQ9HCE6 1279 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 PLIN4Q96Q06 1357 aa18.89■□□□□ 0.61
HDAC7-224ENST00000488927 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 A0A0G2JLL6 359 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-224ENST00000488927 TRIM75PA6NK02 468 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 USP17L10C9JJH3 530 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 RANBP6O60518 1105 aaKnown RBP18.88■□□□□ 0.61
HDAC7-224ENST00000488927 CYP21A2P08686 494 aa18.88■□□□□ 0.61
HDAC7-224ENST00000488927 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms