RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 TBC1D2Q9BYX2 928 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 OSBPL5Q9H0X9 879 aaPredicted RBP10.5□□□□□ -0.73
PRKCB-208ENST00000487674 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.5□□□□□ -0.73
PRKCB-208ENST00000487674 LRP2BPQ9P2M1 347 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.5□□□□□ -0.73
PRKCB-208ENST00000487674 PNMA3Q9UL41 463 aa10.5□□□□□ -0.73
PRKCB-208ENST00000487674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 FAM196BA6NMK8 535 aa10.49□□□□□ -0.73
PRKCB-208ENST00000487674 RIOK3O14730 519 aaKnown RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 TNPO2O14787 897 aaKnown RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 GJB1P08034 283 aa10.49□□□□□ -0.73
PRKCB-208ENST00000487674 GJA8P48165 433 aa10.49□□□□□ -0.73
PRKCB-208ENST00000487674 ZKSCAN2Q63HK3 967 aa10.49□□□□□ -0.73
PRKCB-208ENST00000487674 CCDC84Q86UT8 332 aaPredicted RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 TEX11Q8IYF3 940 aa10.49□□□□□ -0.73
PRKCB-208ENST00000487674 TMEM57Q8N5G2 664 aa10.49□□□□□ -0.73
PRKCB-208ENST00000487674 PROCA1Q8NCQ7 364 aaPredicted RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 ZFP91Q96JP5 570 aaPredicted RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 NOL10Q9BSC4 688 aaKnown RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 GPR108Q9NPR9 543 aa10.49□□□□□ -0.73
PRKCB-208ENST00000487674 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 HERC5Q9UII4 1024 aaKnown RBP10.49□□□□□ -0.73
PRKCB-208ENST00000487674 ADCY3O60266 1144 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 BAG3O95817 575 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 CAP2P40123 477 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 FLT3LGP49771 235 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 OS9Q13438 667 aaPredicted RBP10.48□□□□□ -0.73
PRKCB-208ENST00000487674 IRF5Q13568 498 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 FAM110CQ1W6H9 321 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 TNNI3KQ59H18 835 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 TREML2Q5T2D2 321 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 UBE2Q1Q7Z7E8 422 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 ZNF280CQ8ND82 737 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 SSH3Q8TE77 659 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 SH3RF3Q8TEJ3 882 aaPredicted RBP10.48□□□□□ -0.73
PRKCB-208ENST00000487674 RNF208Q9H0X6 261 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 DHX36Q9H2U1 1008 aaKnown RBP10.48□□□□□ -0.73
PRKCB-208ENST00000487674 GABRQQ9UN88 632 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 FPGT-TNNI3KV9GXZ4 949 aa10.48□□□□□ -0.73
PRKCB-208ENST00000487674 MYO5AQ9Y4I1 1855 aaKnown RBP10.48□□□□□ -0.73
PRKCB-208ENST00000487674 TRIOBPQ9H2D6 2365 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 H0YGN5 161 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 IGSF3O75054 1194 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 GCLCP48506 637 aaPredicted RBP10.47□□□□□ -0.73
PRKCB-208ENST00000487674 FXR1P51114 621 aaKnown RBP eCLIP10.47□□□□□ -0.737e-6■□□□□ 9.7
PRKCB-208ENST00000487674 SPP2Q13103 211 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 PABPC4Q13310 644 aaKnown RBP eCLIP10.47□□□□□ -0.73
PRKCB-208ENST00000487674 CCDC158Q5M9N0 1113 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
PRKCB-208ENST00000487674 NAA16Q6N069 864 aaPredicted RBP10.47□□□□□ -0.73
PRKCB-208ENST00000487674 ANKRD13CQ8N6S4 541 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 U2AF1L4Q8WU68 220 aaKnown RBP10.47□□□□□ -0.73
PRKCB-208ENST00000487674 ZNF512BQ96KM6 892 aaPredicted RBP10.47□□□□□ -0.73
PRKCB-208ENST00000487674 DBNDD2Q9BQY9 259 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 HTATIP2Q9BUP3 242 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 UNC93B1Q9H1C4 597 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 AS3MTQ9HBK9 375 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 PI4KBQ9UBF8 816 aa10.47□□□□□ -0.73
PRKCB-208ENST00000487674 USP17L5A8MUK1 530 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 FARP2O94887 1054 aaPredicted RBP10.46□□□□□ -0.73
PRKCB-208ENST00000487674 INHAP05111 366 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 ELNP15502 786 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 CAPN2P17655 700 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 HMGCS2P54868 508 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 PPP4CP60510 307 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 ATP8B2P98198 1209 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 SH3D19Q5HYK7 790 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 FTSJ3Q8IY81 847 aaKnown RBP10.46□□□□□ -0.73
PRKCB-208ENST00000487674 COA7Q96BR5 231 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 SNRKQ9NRH2 765 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 AATFQ9NY61 560 aaKnown RBP eCLIP10.46□□□□□ -0.73
PRKCB-208ENST00000487674 FLT1P17948 1338 aa10.46□□□□□ -0.73
PRKCB-208ENST00000487674 DOCK3Q8IZD9 2030 aa10.46□□□□□ -0.74
PRKCB-208ENST00000487674 SURF6O75683 361 aaKnown RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 CYP2E1P05181 493 aaPredicted RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 ASNSP08243 561 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 RRP1BQ14684 758 aaKnown RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 ADGRA1Q86SQ6 560 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 METTL16Q86W50 562 aaKnown RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 ITPRIPQ8IWB1 547 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 TGFBRAP1Q8WUH2 860 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 DPF3Q92784 378 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 WDR18Q9BV38 432 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 ASCC2Q9H1I8 757 aaPredicted RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 C1orf115Q9H7X2 142 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 DNAJC18Q9H819 358 aa10.45□□□□□ -0.74
PRKCB-208ENST00000487674 PAK6Q9NQU5 681 aaPredicted RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 DBNLQ9UJU6 430 aaKnown RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
PRKCB-208ENST00000487674 SGPL1O95470 568 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 ZAP70P43403 619 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 MTMR2Q13614 643 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 CERS3Q8IU89 383 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 CRACR2BQ8N4Y2 399 aaPredicted RBP10.44□□□□□ -0.74
PRKCB-208ENST00000487674 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
PRKCB-208ENST00000487674 PIH1D3Q9NQM4 214 aaKnown RBP10.44□□□□□ -0.74
PRKCB-208ENST00000487674 GINM1Q9NU53 330 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms