RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 PTPN22Q9Y2R2 807 aa19.16■□□□□ 0.66
GABPA-203ENST00000487266 POLR3DP05423 398 aaPredicted RBP19.15■□□□□ 0.66
GABPA-203ENST00000487266 ASNSP08243 561 aa19.15■□□□□ 0.66
GABPA-203ENST00000487266 EXOC6Q8TAG9 804 aa19.15■□□□□ 0.66
GABPA-203ENST00000487266 PI4K2BQ8TCG2 481 aa19.15■□□□□ 0.66
GABPA-203ENST00000487266 GPATCH3Q96I76 525 aa19.15■□□□□ 0.66
GABPA-203ENST00000487266 PUS7LQ9H0K6 701 aaKnown RBP19.15■□□□□ 0.66
GABPA-203ENST00000487266 EHD4Q9H223 541 aa19.15■□□□□ 0.66
GABPA-203ENST00000487266 AGTPBP1Q9UPW5 1226 aa19.15■□□□□ 0.66
GABPA-203ENST00000487266 GH2P01242 217 aa19.14■□□□□ 0.65
GABPA-203ENST00000487266 SHMT1P34896 483 aa19.14■□□□□ 0.65
GABPA-203ENST00000487266 UBE3CQ15386 1083 aa19.14■□□□□ 0.65
GABPA-203ENST00000487266 TATDN1Q6P1N9 297 aa19.14■□□□□ 0.65
GABPA-203ENST00000487266 SLC44A5Q8NCS7 719 aa19.14■□□□□ 0.65
GABPA-203ENST00000487266 PTCH2Q9Y6C5 1203 aa19.14■□□□□ 0.65
GABPA-203ENST00000487266 CYP2D7A0A087X1C5 515 aa19.13■□□□□ 0.65
GABPA-203ENST00000487266 BCRP11274 1271 aa19.13■□□□□ 0.65
GABPA-203ENST00000487266 TTC6Q86TZ1 520 aa19.13■□□□□ 0.65
GABPA-203ENST00000487266 KBTBD3Q8NAB2 608 aa19.13■□□□□ 0.65
GABPA-203ENST00000487266 AS3MTQ9HBK9 375 aa19.13■□□□□ 0.65
GABPA-203ENST00000487266 SALL3Q9BXA9 1300 aa19.13■□□□□ 0.65
GABPA-203ENST00000487266 GABPAQ06546 454 aa19.12■□□□□ 0.65
GABPA-203ENST00000487266 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
GABPA-203ENST00000487266 ANKRD45Q5TZF3 282 aa19.12■□□□□ 0.65
GABPA-203ENST00000487266 PROCA1Q8NCQ7 364 aaPredicted RBP19.12■□□□□ 0.65
GABPA-203ENST00000487266 DYNLL2Q96FJ2 89 aa19.12■□□□□ 0.65
GABPA-203ENST00000487266 TRIM47Q96LD4 638 aa19.12■□□□□ 0.65
GABPA-203ENST00000487266 WDR18Q9BV38 432 aa19.12■□□□□ 0.65
GABPA-203ENST00000487266 TBC1D2Q9BYX2 928 aa19.12■□□□□ 0.65
GABPA-203ENST00000487266 SLC45A1Q9Y2W3 748 aa19.12■□□□□ 0.65
GABPA-203ENST00000487266 TTC41PQ6P2S7 1318 aa19.11■□□□□ 0.65
GABPA-203ENST00000487266 MX1P20591 662 aa19.11■□□□□ 0.65
GABPA-203ENST00000487266 CERKLQ49MI3 558 aaPredicted RBP19.11■□□□□ 0.65
GABPA-203ENST00000487266 SH3D19Q5HYK7 790 aa19.11■□□□□ 0.65
GABPA-203ENST00000487266 SMCR8Q8TEV9 937 aaPredicted RBP19.11■□□□□ 0.65
GABPA-203ENST00000487266 SUPT16HQ9Y5B9 1047 aaKnown RBP19.11■□□□□ 0.65
GABPA-203ENST00000487266 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
GABPA-203ENST00000487266 PSMC4P43686 418 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 BACE1P56817 501 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 KIF22Q14807 665 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 RAB3GAP1Q15042 981 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 ZYXQ15942 572 aaKnown RBP19.1■□□□□ 0.65
GABPA-203ENST00000487266 ABCB5Q2M3G0 1257 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 ZSCAN25Q6NSZ9 544 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 ANKRD13CQ8N6S4 541 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 OSBP2Q969R2 916 aa19.1■□□□□ 0.65
GABPA-203ENST00000487266 DOCK3Q8IZD9 2030 aa19.09■□□□□ 0.65
GABPA-203ENST00000487266 M0R2C6 588 aa19.09■□□□□ 0.65
GABPA-203ENST00000487266 PEX10O60683 326 aa19.09■□□□□ 0.65
GABPA-203ENST00000487266 GUCY1A2P33402 732 aa19.09■□□□□ 0.65
GABPA-203ENST00000487266 RGS19P49795 217 aa19.09■□□□□ 0.65
GABPA-203ENST00000487266 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
GABPA-203ENST00000487266 RBBP6Q7Z6E9 1792 aaKnown RBP19.09■□□□□ 0.65
GABPA-203ENST00000487266 USP17L10C9JJH3 530 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 RNF113AO15541 343 aaKnown RBP19.08■□□□□ 0.64
GABPA-203ENST00000487266 GLRX3O76003 335 aaKnown RBP19.08■□□□□ 0.64
GABPA-203ENST00000487266 FMNL1O95466 1100 aaPredicted RBP19.08■□□□□ 0.64
GABPA-203ENST00000487266 IGHDP01880 384 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 OSBPP22059 807 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 IRX6P78412 446 aaPredicted RBP19.08■□□□□ 0.64
GABPA-203ENST00000487266 CLEC10AQ8IUN9 316 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 ACER1Q8TDN7 264 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 APPBP2Q92624 585 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 SEC62Q99442 399 aaKnown RBP19.08■□□□□ 0.64
GABPA-203ENST00000487266 ASCC2Q9H1I8 757 aaPredicted RBP19.08■□□□□ 0.64
GABPA-203ENST00000487266 EMILIN3Q9NT22 766 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 ATP8A2Q9NTI2 1148 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 GINM1Q9NU53 330 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 TMOD4Q9NZQ9 345 aa19.08■□□□□ 0.64
GABPA-203ENST00000487266 USP17L12C9JPN9 530 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 USP17L21D6R901 530 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 ERC2O15083 957 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 MYCP01106 439 aaPredicted RBP19.07■□□□□ 0.64
GABPA-203ENST00000487266 SEPT2Q15019 361 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 B4GALNT3Q6L9W6 998 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 SH3TC2Q8TF17 1288 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 STRBPQ96SI9 672 aaKnown RBP19.07■□□□□ 0.64
GABPA-203ENST00000487266 FEZ1Q99689 392 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 FSD1Q9BTV5 496 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 LNPKQ9C0E8 428 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 PNMA3Q9UL41 463 aa19.07■□□□□ 0.64
GABPA-203ENST00000487266 MKI67P46013 3256 aaKnown RBP19.07■□□□□ 0.64
GABPA-203ENST00000487266 MYPNQ86TC9 1320 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 POTEFA5A3E0 1075 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 MPHOSPH10O00566 681 aaKnown RBP19.06■□□□□ 0.64
GABPA-203ENST00000487266 AKR1B1P15121 316 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 MLLT1Q03111 559 aaPredicted RBP19.06■□□□□ 0.64
GABPA-203ENST00000487266 PRKCZQ05513 592 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 ARHGEF6Q15052 776 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 SLC9C1Q4G0N8 1177 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 C12orf60Q5U649 245 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 CTR9Q6PD62 1173 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 ARMC5Q96C12 935 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 EPB41L4AQ9HCS5 686 aaPredicted RBP19.06■□□□□ 0.64
GABPA-203ENST00000487266 ZBTB47Q9UFB7 747 aaPredicted RBP19.06■□□□□ 0.64
GABPA-203ENST00000487266 SRRDQ9UH36 339 aa19.06■□□□□ 0.64
GABPA-203ENST00000487266 TNRC18O15417 2968 aaPredicted RBP19.06■□□□□ 0.64
GABPA-203ENST00000487266 KIAA0100Q14667 2235 aaKnown RBP19.05■□□□□ 0.64
GABPA-203ENST00000487266 GSG1L2A8MUP6 293 aa19.05■□□□□ 0.64
GABPA-203ENST00000487266 C19orf81C9J6K1 198 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms